Cluster: CGMR051215_CGC53
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR051215
- CGC Family ID: CGCFAM_02530
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_53802 | k141_53802_6 | 7797 | 8726 | + | 3.A.1.1.11 |
| TC | k141_53802 | k141_53802_7 | 8726 | 9565 | + | 3.A.1.1.11 |
| TC | k141_53802 | k141_53802_8 | 9623 | 10981 | + | 3.A.1.1.11 |
| CAZyme | k141_53802 | k141_53802_9 | 11072 | 12817 | + | GH154 |
| CAZyme | k141_53802 | k141_53802_10 | 12801 | 13934 | + | GH88 |
| CAZyme | k141_53802 | k141_53802_11 | 13997 | 15109 | + | GH105 |
| NULL(UNKNOWN) | k141_53802 | k141_53802_12 | 15614 | 16348 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_53802 | k141_53802_13 | 16655 | 18673 | - | 2.A.72.1.3 |
Gene ID: k141_53802_6
Type: TC
Location: 7797 - 8726 (+)
Type: TC
Location: 7797 - 8726 (+)
Gene ID: k141_53802_7
Type: TC
Location: 8726 - 9565 (+)
Type: TC
Location: 8726 - 9565 (+)
Gene ID: k141_53802_8
Type: TC
Location: 9623 - 10981 (+)
Type: TC
Location: 9623 - 10981 (+)
Gene ID: k141_53802_9
Type: CAZyme
Location: 11072 - 12817 (+)
Type: CAZyme
Location: 11072 - 12817 (+)
Gene ID: k141_53802_10
Type: CAZyme
Location: 12801 - 13934 (+)
Type: CAZyme
Location: 12801 - 13934 (+)
Gene ID: k141_53802_11
Type: CAZyme
Location: 13997 - 15109 (+)
Type: CAZyme
Location: 13997 - 15109 (+)
Gene ID: k141_53802_12
Type:
Location: 15614 - 16348 (+)
Type:
Location: 15614 - 16348 (+)
Gene ID: k141_53802_13
Type: TC
Location: 16655 - 18673 (-)
Type: TC
Location: 16655 - 18673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora xylanolytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.