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Cluster: CGMR051215_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_79351 k141_79351_19 16499 18706 + 2.A.21.9.1
TC k141_79351 k141_79351_20 18907 21546 + 3.A.3.2.21
TC k141_79351 k141_79351_21 21701 23077 + 2.A.11.1.3
TC k141_79351 k141_79351_22 23114 24232 + 3.B.1.1.5
NULL(UNKNOWN) k141_79351 k141_79351_23 24288 24419 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_79351 k141_79351_24 24515 26119 - HTH_AraC | HTH_AraC
TC k141_79351 k141_79351_25 26112 27905 - 8.A.59.2.1
STP k141_79351 k141_79351_26 28104 29444 + SBP_bac_1
TC k141_79351 k141_79351_27 29550 30431 + 3.A.1.1.7
TC k141_79351 k141_79351_28 30428 31249 + 3.A.1.1.45
CAZyme k141_79351 k141_79351_29 31361 33847 + GH136
NULL(UNKNOWN) k141_79351 k141_79351_30 33872 34468 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_79351 k141_79351_31 34522 35064 - Pro_CA
CAZyme k141_79351 k141_79351_32 35423 41383 + GH28 | PL9_1
Gene ID: k141_79351_19
Type: TC
Location: 16499 - 18706 (+)
Gene ID: k141_79351_20
Type: TC
Location: 18907 - 21546 (+)
Gene ID: k141_79351_21
Type: TC
Location: 21701 - 23077 (+)
Gene ID: k141_79351_22
Type: TC
Location: 23114 - 24232 (+)
Gene ID: k141_79351_23
Type:
Location: 24288 - 24419 (+)
Gene ID: k141_79351_24
Type: TF
Location: 24515 - 26119 (-)
Gene ID: k141_79351_25
Type: TC
Location: 26112 - 27905 (-)
Gene ID: k141_79351_26
Type: STP
Location: 28104 - 29444 (+)
Gene ID: k141_79351_27
Type: TC
Location: 29550 - 30431 (+)
Gene ID: k141_79351_28
Type: TC
Location: 30428 - 31249 (+)
Gene ID: k141_79351_29
Type: CAZyme
Location: 31361 - 33847 (+)
Gene ID: k141_79351_30
Type:
Location: 33872 - 34468 (+)
Gene ID: k141_79351_31
Type: pfam
Location: 34522 - 35064 (-)
Gene ID: k141_79351_32
Type: CAZyme
Location: 35423 - 41383 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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