Cluster: CGMR051215_CGC46
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: CGMR051215
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_17591 | k141_17591_239 | 243274 | 244467 | - | 2.A.1.2.90 |
| pfam | k141_17591 | k141_17591_240 | 244464 | 245303 | - | PRD | PRD | CAT_RBD |
| CAZyme | k141_17591 | k141_17591_241 | 245344 | 246768 | - | GH1 |
| TC | k141_17591 | k141_17591_242 | 246781 | 248694 | - | 4.A.1.2.11 |
| STP | k141_17591 | k141_17591_243 | 249064 | 250662 | - | SBP_bac_1 |
| TC | k141_17591 | k141_17591_244 | 250718 | 251617 | - | 3.A.1.1.29 |
| TC | k141_17591 | k141_17591_245 | 251631 | 252584 | - | 3.A.1.1.10 |
Gene ID: k141_17591_239
Type: TC
Location: 243274 - 244467 (-)
Type: TC
Location: 243274 - 244467 (-)
Gene ID: k141_17591_240
Type: pfam
Location: 244464 - 245303 (-)
Type: pfam
Location: 244464 - 245303 (-)
Gene ID: k141_17591_241
Type: CAZyme
Location: 245344 - 246768 (-)
Type: CAZyme
Location: 245344 - 246768 (-)
Gene ID: k141_17591_242
Type: TC
Location: 246781 - 248694 (-)
Type: TC
Location: 246781 - 248694 (-)
Gene ID: k141_17591_243
Type: STP
Location: 249064 - 250662 (-)
Type: STP
Location: 249064 - 250662 (-)
Gene ID: k141_17591_244
Type: TC
Location: 250718 - 251617 (-)
Type: TC
Location: 250718 - 251617 (-)
Gene ID: k141_17591_245
Type: TC
Location: 251631 - 252584 (-)
Type: TC
Location: 251631 - 252584 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora xylanolytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.