Cluster: CGMR051215_CGC40
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR051215
- CGC Family ID: CGCFAM_00149
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_63002 | k141_63002_19 | 18289 | 18816 | - | 9.B.156.3.1 |
| pfam | k141_63002 | k141_63002_20 | 18933 | 19292 | + | Glutaredoxin | ArsC |
| NULL(UNKNOWN) | k141_63002 | k141_63002_21 | 19424 | 19984 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_63002 | k141_63002_22 | 20097 | 21164 | + | GT28 |
| STP | k141_63002 | k141_63002_23 | 21166 | 21708 | - | Sigma70_r2 |
| pfam | k141_63002 | k141_63002_24 | 21726 | 22142 | - | HIT | DcpS_C |
| TC | k141_63002 | k141_63002_25 | 22167 | 22787 | - | 9.B.104.1.3 |
Gene ID: k141_63002_19
Type: TC
Location: 18289 - 18816 (-)
Type: TC
Location: 18289 - 18816 (-)
Gene ID: k141_63002_20
Type: pfam
Location: 18933 - 19292 (+)
Type: pfam
Location: 18933 - 19292 (+)
Gene ID: k141_63002_21
Type:
Location: 19424 - 19984 (-)
Type:
Location: 19424 - 19984 (-)
Gene ID: k141_63002_22
Type: CAZyme
Location: 20097 - 21164 (+)
Type: CAZyme
Location: 20097 - 21164 (+)
Gene ID: k141_63002_23
Type: STP
Location: 21166 - 21708 (-)
Type: STP
Location: 21166 - 21708 (-)
Gene ID: k141_63002_24
Type: pfam
Location: 21726 - 22142 (-)
Type: pfam
Location: 21726 - 22142 (-)
Gene ID: k141_63002_25
Type: TC
Location: 22167 - 22787 (-)
Type: TC
Location: 22167 - 22787 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora xylanolytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.