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Cluster: CGMR051215_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_39943 k141_39943_123 120976 122295 - GH28
TC k141_39943 k141_39943_124 122470 123315 - 3.A.1.1.11
TC k141_39943 k141_39943_125 123320 124231 - 3.A.1.1.11
STP k141_39943 k141_39943_126 124301 125653 - SBP_bac_1
TC k141_39943 k141_39943_127 125865 127640 + 8.A.59.2.1
TF k141_39943 k141_39943_128 127634 129166 + HTH_AraC
pfam k141_39943 k141_39943_129 129237 130085 - AP_endonuc_2
CAZyme k141_39943 k141_39943_130 130158 131312 - GH177
CAZyme k141_39943 k141_39943_131 131315 132334 - GH177
Gene ID: k141_39943_123
Type: CAZyme
Location: 120976 - 122295 (-)
Gene ID: k141_39943_124
Type: TC
Location: 122470 - 123315 (-)
Gene ID: k141_39943_125
Type: TC
Location: 123320 - 124231 (-)
Gene ID: k141_39943_126
Type: STP
Location: 124301 - 125653 (-)
Gene ID: k141_39943_127
Type: TC
Location: 125865 - 127640 (+)
Gene ID: k141_39943_128
Type: TF
Location: 127634 - 129166 (+)
Gene ID: k141_39943_129
Type: pfam
Location: 129237 - 130085 (-)
Gene ID: k141_39943_130
Type: CAZyme
Location: 130158 - 131312 (-)
Gene ID: k141_39943_131
Type: CAZyme
Location: 131315 - 132334 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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