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Cluster: CGMR051215_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_67621 k141_67621_2 747 2555 - PL33_1
TF k141_67621 k141_67621_3 2568 4184 - HTH_AraC | HTH_AraC
TC k141_67621 k141_67621_4 4189 6075 - 8.A.59.2.1
STP k141_67621 k141_67621_5 6401 7747 + SBP_bac_1
TC k141_67621 k141_67621_6 7843 8910 + 3.A.1.1.34
TC k141_67621 k141_67621_7 8929 9765 + 3.A.1.1.39
CAZyme k141_67621 k141_67621_8 9776 11587 + GH2
CAZyme k141_67621 k141_67621_9 11571 12752 + GH88
CAZyme k141_67621 k141_67621_10 12786 14483 + GH154
CAZyme k141_67621 k141_67621_11 14582 17608 + GH2
Gene ID: k141_67621_2
Type: CAZyme
Location: 747 - 2555 (-)
Gene ID: k141_67621_3
Type: TF
Location: 2568 - 4184 (-)
Gene ID: k141_67621_4
Type: TC
Location: 4189 - 6075 (-)
Gene ID: k141_67621_5
Type: STP
Location: 6401 - 7747 (+)
Gene ID: k141_67621_6
Type: TC
Location: 7843 - 8910 (+)
Gene ID: k141_67621_7
Type: TC
Location: 8929 - 9765 (+)
Gene ID: k141_67621_8
Type: CAZyme
Location: 9776 - 11587 (+)
Gene ID: k141_67621_9
Type: CAZyme
Location: 11571 - 12752 (+)
Gene ID: k141_67621_10
Type: CAZyme
Location: 12786 - 14483 (+)
Gene ID: k141_67621_11
Type: CAZyme
Location: 14582 - 17608 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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