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Cluster: CGMR051215_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_31178 k141_31178_31 31702 33024 - GH4
TF k141_31178 k141_31178_32 33144 33956 + HTH_AraC | HTH_AraC
STP k141_31178 k141_31178_33 34089 35429 + SBP_bac_1
TC k141_31178 k141_31178_34 35490 36398 + 3.A.1.1.11
TC k141_31178 k141_31178_35 36413 37243 + 3.A.1.1.36
CAZyme k141_31178 k141_31178_36 37258 39474 + GH36
TF k141_31178 k141_31178_37 39520 39870 - DUF24
pfam k141_31178 k141_31178_38 40046 41041 + ADH_zinc_N | ADH_N | ADH_zinc_N_2
TC k141_31178 k141_31178_39 41514 42902 + 2.A.66.1.32
peptidase k141_31178 k141_31178_40 42933 43820 + S09.UPW
CAZyme k141_31178 k141_31178_41 43947 45227 - GH140
TC k141_31178 k141_31178_42 45244 47106 - 4.A.1.2.2
Gene ID: k141_31178_31
Type: CAZyme
Location: 31702 - 33024 (-)
Gene ID: k141_31178_32
Type: TF
Location: 33144 - 33956 (+)
Gene ID: k141_31178_33
Type: STP
Location: 34089 - 35429 (+)
Gene ID: k141_31178_34
Type: TC
Location: 35490 - 36398 (+)
Gene ID: k141_31178_35
Type: TC
Location: 36413 - 37243 (+)
Gene ID: k141_31178_36
Type: CAZyme
Location: 37258 - 39474 (+)
Gene ID: k141_31178_37
Type: TF
Location: 39520 - 39870 (-)
Gene ID: k141_31178_38
Type: pfam
Location: 40046 - 41041 (+)
Gene ID: k141_31178_39
Type: TC
Location: 41514 - 42902 (+)
Gene ID: k141_31178_40
Type: peptidase
Location: 42933 - 43820 (+)
Gene ID: k141_31178_41
Type: CAZyme
Location: 43947 - 45227 (-)
Gene ID: k141_31178_42
Type: TC
Location: 45244 - 47106 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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