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Cluster: CGMR051215_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_28330 k141_28330_55 58912 61752 + 3.A.3.1.8
TC k141_28330 k141_28330_56 61749 62414 + 3.A.3.1.8
TC k141_28330 k141_28330_57 62417 63085 + 3.A.3.1.8
peptidase k141_28330 k141_28330_58 63118 63861 + S33.UNW
pfam k141_28330 k141_28330_59 63968 64801 - AP_endonuc_2
CAZyme k141_28330 k141_28330_60 64816 66369 - GH28
TC k141_28330 k141_28330_61 66448 67299 - 3.A.1.1.11
TC k141_28330 k141_28330_62 67305 68204 - 3.A.1.1.11
NULL(UNKNOWN) k141_28330 k141_28330_63 68210 68878 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_28330 k141_28330_64 68966 70342 - 3.A.1.1.11
TF k141_28330 k141_28330_65 70571 71437 + HTH_AraC | HTH_AraC
CAZyme k141_28330 k141_28330_66 71486 72607 - GH105
TF k141_28330 k141_28330_67 72669 73667 - LacI
TC k141_28330 k141_28330_68 74042 75412 + 3.A.1.1.11
Gene ID: k141_28330_55
Type: TC
Location: 58912 - 61752 (+)
Gene ID: k141_28330_56
Type: TC
Location: 61749 - 62414 (+)
Gene ID: k141_28330_57
Type: TC
Location: 62417 - 63085 (+)
Gene ID: k141_28330_58
Type: peptidase
Location: 63118 - 63861 (+)
Gene ID: k141_28330_59
Type: pfam
Location: 63968 - 64801 (-)
Gene ID: k141_28330_60
Type: CAZyme
Location: 64816 - 66369 (-)
Gene ID: k141_28330_61
Type: TC
Location: 66448 - 67299 (-)
Gene ID: k141_28330_62
Type: TC
Location: 67305 - 68204 (-)
Gene ID: k141_28330_63
Type:
Location: 68210 - 68878 (-)
Gene ID: k141_28330_64
Type: TC
Location: 68966 - 70342 (-)
Gene ID: k141_28330_65
Type: TF
Location: 70571 - 71437 (+)
Gene ID: k141_28330_66
Type: CAZyme
Location: 71486 - 72607 (-)
Gene ID: k141_28330_67
Type: TF
Location: 72669 - 73667 (-)
Gene ID: k141_28330_68
Type: TC
Location: 74042 - 75412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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