Cluster: CGMR051215_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR051215
- CGC Family ID: CGCFAM_00557
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_56982 | k141_56982_23 | 17491 | 19575 | - | GH3 |
| TC | k141_56982 | k141_56982_24 | 19763 | 21562 | + | 8.A.59.2.1 |
| TF | k141_56982 | k141_56982_25 | 21559 | 23103 | + | HTH_AraC | HTH_AraC |
| STP | k141_56982 | k141_56982_26 | 23179 | 24936 | - | SBP_bac_1 |
| TC | k141_56982 | k141_56982_27 | 24956 | 25876 | - | 3.A.1.1.29 |
| TC | k141_56982 | k141_56982_28 | 25891 | 26823 | - | 3.A.1.1.29 |
Gene ID: k141_56982_23
Type: CAZyme
Location: 17491 - 19575 (-)
Type: CAZyme
Location: 17491 - 19575 (-)
Gene ID: k141_56982_24
Type: TC
Location: 19763 - 21562 (+)
Type: TC
Location: 19763 - 21562 (+)
Gene ID: k141_56982_25
Type: TF
Location: 21559 - 23103 (+)
Type: TF
Location: 21559 - 23103 (+)
Gene ID: k141_56982_26
Type: STP
Location: 23179 - 24936 (-)
Type: STP
Location: 23179 - 24936 (-)
Gene ID: k141_56982_27
Type: TC
Location: 24956 - 25876 (-)
Type: TC
Location: 24956 - 25876 (-)
Gene ID: k141_56982_28
Type: TC
Location: 25891 - 26823 (-)
Type: TC
Location: 25891 - 26823 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora xylanolytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.