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Cluster: CGMR051215_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_83549 k141_83549_110 122262 124031 + 9.B.33.1.1
TF k141_83549 k141_83549_111 124046 125635 + HTH_AraC | HTH_AraC
TC k141_83549 k141_83549_112 125775 127460 + 3.A.1.1.29
TC k141_83549 k141_83549_113 127532 128467 + 3.A.1.1.29
TC k141_83549 k141_83549_114 128482 129381 + 3.A.1.1.29
CAZyme k141_83549 k141_83549_115 129394 130521 + GH8
TC k141_83549 k141_83549_116 130700 131707 + 9.B.70.1.1
pfam k141_83549 k141_83549_117 131700 132230 + Spore_III_AB
pfam k141_83549 k141_83549_118 132241 132435 + SpoIIIAC
TC k141_83549 k141_83549_119 132444 132830 + 9.B.70.1.1
Gene ID: k141_83549_110
Type: TC
Location: 122262 - 124031 (+)
Gene ID: k141_83549_111
Type: TF
Location: 124046 - 125635 (+)
Gene ID: k141_83549_112
Type: TC
Location: 125775 - 127460 (+)
Gene ID: k141_83549_113
Type: TC
Location: 127532 - 128467 (+)
Gene ID: k141_83549_114
Type: TC
Location: 128482 - 129381 (+)
Gene ID: k141_83549_115
Type: CAZyme
Location: 129394 - 130521 (+)
Gene ID: k141_83549_116
Type: TC
Location: 130700 - 131707 (+)
Gene ID: k141_83549_117
Type: pfam
Location: 131700 - 132230 (+)
Gene ID: k141_83549_118
Type: pfam
Location: 132241 - 132435 (+)
Gene ID: k141_83549_119
Type: TC
Location: 132444 - 132830 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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