Cluster: CGMR051215_CGC16
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR051215
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_83549 | k141_83549_7 | 6742 | 8319 | + | 3.A.1.1.9 |
| TC | k141_83549 | k141_83549_8 | 8337 | 9296 | + | 3.A.1.1.29 |
| TC | k141_83549 | k141_83549_9 | 9311 | 10147 | + | 3.A.1.1.9 |
| CAZyme | k141_83549 | k141_83549_10 | 10227 | 11759 | + | CBM91 | GH43_10 |
| CAZyme | k141_83549 | k141_83549_11 | 11710 | 13485 | + | CBM91 | GH43_12 |
| CAZyme | k141_83549 | k141_83549_12 | 13439 | 14119 | + | CE12 |
| TC | k141_83549 | k141_83549_13 | 14129 | 15916 | + | 3.A.1.106.8 |
| CAZyme | k141_83549 | k141_83549_14 | 16332 | 18290 | + | GH120 | GH120 |
| TC | k141_83549 | k141_83549_15 | 18315 | 19235 | + | 3.A.1.1.10 |
| TC | k141_83549 | k141_83549_16 | 19255 | 20175 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | k141_83549 | k141_83549_17 | 20228 | 22006 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_83549 | k141_83549_18 | 22257 | 24116 | + | GH43_27 |
| CAZyme | k141_83549 | k141_83549_19 | 24094 | 25608 | + | GH39 |
| CAZyme | k141_83549 | k141_83549_20 | 25640 | 26728 | + | CE1 |
| peptidase | k141_83549 | k141_83549_21 | 26760 | 28298 | + | S09.UPW |
| CAZyme | k141_83549 | k141_83549_22 | 28295 | 30124 | + | GH43_27 |
Gene ID: k141_83549_7
Type: TC
Location: 6742 - 8319 (+)
Type: TC
Location: 6742 - 8319 (+)
Gene ID: k141_83549_8
Type: TC
Location: 8337 - 9296 (+)
Type: TC
Location: 8337 - 9296 (+)
Gene ID: k141_83549_9
Type: TC
Location: 9311 - 10147 (+)
Type: TC
Location: 9311 - 10147 (+)
Gene ID: k141_83549_10
Type: CAZyme
Location: 10227 - 11759 (+)
Type: CAZyme
Location: 10227 - 11759 (+)
Gene ID: k141_83549_11
Type: CAZyme
Location: 11710 - 13485 (+)
Type: CAZyme
Location: 11710 - 13485 (+)
Gene ID: k141_83549_12
Type: CAZyme
Location: 13439 - 14119 (+)
Type: CAZyme
Location: 13439 - 14119 (+)
Gene ID: k141_83549_13
Type: TC
Location: 14129 - 15916 (+)
Type: TC
Location: 14129 - 15916 (+)
Gene ID: k141_83549_14
Type: CAZyme
Location: 16332 - 18290 (+)
Type: CAZyme
Location: 16332 - 18290 (+)
Gene ID: k141_83549_15
Type: TC
Location: 18315 - 19235 (+)
Type: TC
Location: 18315 - 19235 (+)
Gene ID: k141_83549_16
Type: TC
Location: 19255 - 20175 (+)
Type: TC
Location: 19255 - 20175 (+)
Gene ID: k141_83549_17
Type:
Location: 20228 - 22006 (+)
Type:
Location: 20228 - 22006 (+)
Gene ID: k141_83549_18
Type: CAZyme
Location: 22257 - 24116 (+)
Type: CAZyme
Location: 22257 - 24116 (+)
Gene ID: k141_83549_19
Type: CAZyme
Location: 24094 - 25608 (+)
Type: CAZyme
Location: 24094 - 25608 (+)
Gene ID: k141_83549_20
Type: CAZyme
Location: 25640 - 26728 (+)
Type: CAZyme
Location: 25640 - 26728 (+)
Gene ID: k141_83549_21
Type: peptidase
Location: 26760 - 28298 (+)
Type: peptidase
Location: 26760 - 28298 (+)
Gene ID: k141_83549_22
Type: CAZyme
Location: 28295 - 30124 (+)
Type: CAZyme
Location: 28295 - 30124 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Species
Lacrimispora xylanolytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.