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Cluster: CGMR051215_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_72674 k141_72674_191 198937 199821 - 3.A.1.1.11
TC k141_72674 k141_72674_192 199823 200695 - 3.A.1.1.11
TC k141_72674 k141_72674_193 200778 202133 - 3.A.1.1.11
CAZyme k141_72674 k141_72674_194 202184 204145 - GH67
TF k141_72674 k141_72674_195 204451 205275 + HTH_AraC | HTH_AraC
pfam k141_72674 k141_72674_196 205278 205811 + AAA_18
TC k141_72674 k141_72674_197 205889 206869 + 3.A.1.14.7
TF k141_72674 k141_72674_198 206940 209318 - HTH_AraC | HTH_AraC
TC k141_72674 k141_72674_199 209460 210413 + 3.A.1.1.10
TC k141_72674 k141_72674_200 210430 211293 + 3.A.1.1.10
STP k141_72674 k141_72674_201 211341 212993 + SBP_bac_1
pfam k141_72674 k141_72674_202 213036 214130 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme k141_72674 k141_72674_203 214136 215302 + GH109
pfam k141_72674 k141_72674_204 215408 215629 + TusA
TF k141_72674 k141_72674_205 215619 216518 - HTH_1
TC k141_72674 k141_72674_206 216757 217449 + 9.B.102.1.4
pfam k141_72674 k141_72674_207 217475 217702 + TusA
TC k141_72674 k141_72674_208 217731 218279 + 9.B.102.2.4
STP k141_72674 k141_72674_209 218296 219522 + Pyr_redox_2
CAZyme k141_72674 k141_72674_210 219603 222101 - GT2
CAZyme k141_72674 k141_72674_211 222531 228335 + GT84
CAZyme k141_72674 k141_72674_212 228341 230734 + GH94
Gene ID: k141_72674_191
Type: TC
Location: 198937 - 199821 (-)
Gene ID: k141_72674_192
Type: TC
Location: 199823 - 200695 (-)
Gene ID: k141_72674_193
Type: TC
Location: 200778 - 202133 (-)
Gene ID: k141_72674_194
Type: CAZyme
Location: 202184 - 204145 (-)
Gene ID: k141_72674_195
Type: TF
Location: 204451 - 205275 (+)
Gene ID: k141_72674_196
Type: pfam
Location: 205278 - 205811 (+)
Gene ID: k141_72674_197
Type: TC
Location: 205889 - 206869 (+)
Gene ID: k141_72674_198
Type: TF
Location: 206940 - 209318 (-)
Gene ID: k141_72674_199
Type: TC
Location: 209460 - 210413 (+)
Gene ID: k141_72674_200
Type: TC
Location: 210430 - 211293 (+)
Gene ID: k141_72674_201
Type: STP
Location: 211341 - 212993 (+)
Gene ID: k141_72674_202
Type: pfam
Location: 213036 - 214130 (+)
Gene ID: k141_72674_203
Type: CAZyme
Location: 214136 - 215302 (+)
Gene ID: k141_72674_204
Type: pfam
Location: 215408 - 215629 (+)
Gene ID: k141_72674_205
Type: TF
Location: 215619 - 216518 (-)
Gene ID: k141_72674_206
Type: TC
Location: 216757 - 217449 (+)
Gene ID: k141_72674_207
Type: pfam
Location: 217475 - 217702 (+)
Gene ID: k141_72674_208
Type: TC
Location: 217731 - 218279 (+)
Gene ID: k141_72674_209
Type: STP
Location: 218296 - 219522 (+)
Gene ID: k141_72674_210
Type: CAZyme
Location: 219603 - 222101 (-)
Gene ID: k141_72674_211
Type: CAZyme
Location: 222531 - 228335 (+)
Gene ID: k141_72674_212
Type: CAZyme
Location: 228341 - 230734 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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