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Cluster: CGMR051145_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_4147 k141_4147_3 1353 3890 + GT51
pfam k141_4147 k141_4147_4 3925 4281 - SpoVAC_SpoVAEB
TC k141_4147 k141_4147_5 4281 5297 - 9.A.11.1.1
TC k141_4147 k141_4147_6 5294 5758 - 9.A.11.1.1
TC k141_4147 k141_4147_7 5790 6206 - 9.A.11.1.1
TC k141_4147 k141_4147_8 6193 6816 - 9.A.11.1.1
TF k141_4147 k141_4147_9 6939 7472 + 0041905
pfam k141_4147 k141_4147_10 7473 8075 - MMR_HSR1 | FeoB_N
CAZyme k141_4147 k141_4147_11 8133 8903 - CE4
Gene ID: k141_4147_3
Type: CAZyme
Location: 1353 - 3890 (+)
Gene ID: k141_4147_4
Type: pfam
Location: 3925 - 4281 (-)
Gene ID: k141_4147_5
Type: TC
Location: 4281 - 5297 (-)
Gene ID: k141_4147_6
Type: TC
Location: 5294 - 5758 (-)
Gene ID: k141_4147_7
Type: TC
Location: 5790 - 6206 (-)
Gene ID: k141_4147_8
Type: TC
Location: 6193 - 6816 (-)
Gene ID: k141_4147_9
Type: TF
Location: 6939 - 7472 (+)
Gene ID: k141_4147_10
Type: pfam
Location: 7473 - 8075 (-)
Gene ID: k141_4147_11
Type: CAZyme
Location: 8133 - 8903 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_4147_3 vegan > omnivore 1.89862 0.00560
k141_4147_6 vegan > omnivore 1.02006 0.00560
k141_4147_8 vegan > omnivore 1.92884 0.00560

🧭 Explore Read Mapping of CGC

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