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Cluster: CGMR051145_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_202827 k141_202827_81 73175 75097 - GH13_39
CAZyme k141_202827 k141_202827_82 75125 77563 - GT35
CAZyme k141_202827 k141_202827_83 77672 79117 - GT5
pfam k141_202827 k141_202827_84 79110 80243 - NTP_transferase | Hexapep_GlmU
pfam k141_202827 k141_202827_85 80257 81441 - NTP_transferase | Hexapep_GlmU
CAZyme k141_202827 k141_202827_86 81458 83692 - CBM48 | GH13_9
STP k141_202827 k141_202827_87 84070 85287 - ACT | PALP
TC k141_202827 k141_202827_88 85289 86224 - 3.A.5.1.1
Gene ID: k141_202827_81
Type: CAZyme
Location: 73175 - 75097 (-)
Gene ID: k141_202827_82
Type: CAZyme
Location: 75125 - 77563 (-)
Gene ID: k141_202827_83
Type: CAZyme
Location: 77672 - 79117 (-)
Gene ID: k141_202827_84
Type: pfam
Location: 79110 - 80243 (-)
Gene ID: k141_202827_85
Type: pfam
Location: 80257 - 81441 (-)
Gene ID: k141_202827_86
Type: CAZyme
Location: 81458 - 83692 (-)
Gene ID: k141_202827_87
Type: STP
Location: 84070 - 85287 (-)
Gene ID: k141_202827_88
Type: TC
Location: 85289 - 86224 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_202827_82 vegan > omnivore 1.29732 0.00560

🧭 Explore Read Mapping of CGC

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