dbCAN HGM

Cluster: CGMR051145_CGC2

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	k141_7590	k141_7590_8	6930	7787	+	CE4
TF	k141_7590	k141_7590_9	8013	8720	+	HTH_AraC
TC	k141_7590	k141_7590_10	8740	10527	+	3.A.1.21.1
TC	k141_7590	k141_7590_11	10527	12263	+	3.A.1.106.2
TF	k141_7590	k141_7590_12	12439	13236	+	MerR
TC	k141_7590	k141_7590_13	13312	14724	+	2.A.25.1.3
pfam	k141_7590	k141_7590_14	14851	15120	+	DUF1294
STP	k141_7590	k141_7590_15	15203	17110	+	EAL \| GGDEF
TC	k141_7590	k141_7590_16	17285	18505	+	2.A.23.1.5

Gene ID: k141_7590_8
Type: CAZyme
Location: 6930 - 7787 (+)

Gene ID: k141_7590_9
Type: TF
Location: 8013 - 8720 (+)

Gene ID: k141_7590_10
Type: TC
Location: 8740 - 10527 (+)

Gene ID: k141_7590_11
Type: TC
Location: 10527 - 12263 (+)

Gene ID: k141_7590_12
Type: TF
Location: 12439 - 13236 (+)

Gene ID: k141_7590_13
Type: TC
Location: 13312 - 14724 (+)

Gene ID: k141_7590_14
Type: pfam
Location: 14851 - 15120 (+)

Gene ID: k141_7590_15
Type: STP
Location: 15203 - 17110 (+)

Gene ID: k141_7590_16
Type: TC
Location: 17285 - 18505 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
k141_7590_9	vegan > omnivore	1.36487	0.00560
k141_7590_10	vegan > omnivore	1.35200	0.00560
k141_7590_11	vegan > omnivore	1.23815	0.00560
k141_7590_15	vegan > omnivore	2.07619	0.00560

Gene ID	Condition Pair	log2FC	FDR P-value
k141_7590_9	nonIBD > UC	1.72075	0.00968