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Cluster: CGMR050919_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_52547 k141_52547_38 35932 37353 - GH1
TC k141_52547 k141_52547_39 37429 39207 - 4.A.3.1.1
TF k141_52547 k141_52547_40 39491 40492 + LacI
TC k141_52547 k141_52547_41 40905 42665 - 4.A.3.1.1
CAZyme k141_52547 k141_52547_42 42842 44284 - GH1
TF k141_52547 k141_52547_43 44626 45663 + LacI
CAZyme k141_52547 k141_52547_44 45931 46695 - GH1
STP k141_52547 k141_52547_45 46827 47084 + Peripla_BP_3
TC k141_52547 k141_52547_46 47299 47637 + 4.A.3.1.2
Gene ID: k141_52547_38
Type: CAZyme
Location: 35932 - 37353 (-)
Gene ID: k141_52547_39
Type: TC
Location: 37429 - 39207 (-)
Gene ID: k141_52547_40
Type: TF
Location: 39491 - 40492 (+)
Gene ID: k141_52547_41
Type: TC
Location: 40905 - 42665 (-)
Gene ID: k141_52547_42
Type: CAZyme
Location: 42842 - 44284 (-)
Gene ID: k141_52547_43
Type: TF
Location: 44626 - 45663 (+)
Gene ID: k141_52547_44
Type: CAZyme
Location: 45931 - 46695 (-)
Gene ID: k141_52547_45
Type: STP
Location: 46827 - 47084 (+)
Gene ID: k141_52547_46
Type: TC
Location: 47299 - 47637 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_52547_43 vegan > omnivore 1.05447 0.01287
k141_52547_43 vegetarian > omnivore 1.17734 0.02049

🧭 Explore Read Mapping of CGC

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