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Cluster: CGMR050532_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_442081 k141_442081_32 29804 31207 + 9.A.25.1.1
pfam k141_442081 k141_442081_33 31253 32017 + GldL_N
TC k141_442081 k141_442081_34 32030 33607 + 9.A.25.1.1
pfam k141_442081 k141_442081_35 33653 34729 + GldN
pfam k141_442081 k141_442081_36 34882 35502 + OMP_b-brl | OMP_b-brl_2
TC k141_442081 k141_442081_37 35627 37873 + 3.A.11.3.1
pfam k141_442081 k141_442081_38 38007 41360 + TMEM260-like
CAZyme k141_442081 k141_442081_39 41374 41985 + CE4
STP k141_442081 k141_442081_40 41985 42908 + Fer4
peptidase k141_442081 k141_442081_41 42914 44269 - S13.UPW
TC k141_442081 k141_442081_42 44478 46046 + 3.D.10.1.4
Gene ID: k141_442081_32
Type: TC
Location: 29804 - 31207 (+)
Gene ID: k141_442081_33
Type: pfam
Location: 31253 - 32017 (+)
Gene ID: k141_442081_34
Type: TC
Location: 32030 - 33607 (+)
Gene ID: k141_442081_35
Type: pfam
Location: 33653 - 34729 (+)
Gene ID: k141_442081_36
Type: pfam
Location: 34882 - 35502 (+)
Gene ID: k141_442081_37
Type: TC
Location: 35627 - 37873 (+)
Gene ID: k141_442081_38
Type: pfam
Location: 38007 - 41360 (+)
Gene ID: k141_442081_39
Type: CAZyme
Location: 41374 - 41985 (+)
Gene ID: k141_442081_40
Type: STP
Location: 41985 - 42908 (+)
Gene ID: k141_442081_41
Type: peptidase
Location: 42914 - 44269 (-)
Gene ID: k141_442081_42
Type: TC
Location: 44478 - 46046 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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