Cluster: CGMR050420_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR050420
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_306324 | k141_306324_16 | 12836 | 14632 | + | GH43_26 |
| pfam | k141_306324 | k141_306324_17 | 14651 | 15142 | - | LOR |
| CAZyme | k141_306324 | k141_306324_18 | 15218 | 16960 | + | GH84 |
| pfam | k141_306324 | k141_306324_19 | 16957 | 18291 | - | DUF1576 | DUF1576 |
| pfam | k141_306324 | k141_306324_20 | 18489 | 19508 | + | WYL |
| TC | k141_306324 | k141_306324_21 | 19500 | 20246 | - | 3.A.1.17.13 |
| TC | k141_306324 | k141_306324_22 | 20256 | 21299 | - | 3.A.1.17.8 |
| TC | k141_306324 | k141_306324_23 | 21312 | 22106 | - | 3.A.1.17.8 |
Gene ID: k141_306324_16
Type: CAZyme
Location: 12836 - 14632 (+)
Type: CAZyme
Location: 12836 - 14632 (+)
Gene ID: k141_306324_17
Type: pfam
Location: 14651 - 15142 (-)
Type: pfam
Location: 14651 - 15142 (-)
Gene ID: k141_306324_18
Type: CAZyme
Location: 15218 - 16960 (+)
Type: CAZyme
Location: 15218 - 16960 (+)
Gene ID: k141_306324_19
Type: pfam
Location: 16957 - 18291 (-)
Type: pfam
Location: 16957 - 18291 (-)
Gene ID: k141_306324_20
Type: pfam
Location: 18489 - 19508 (+)
Type: pfam
Location: 18489 - 19508 (+)
Gene ID: k141_306324_21
Type: TC
Location: 19500 - 20246 (-)
Type: TC
Location: 19500 - 20246 (-)
Gene ID: k141_306324_22
Type: TC
Location: 20256 - 21299 (-)
Type: TC
Location: 20256 - 21299 (-)
Gene ID: k141_306324_23
Type: TC
Location: 21312 - 22106 (-)
Type: TC
Location: 21312 - 22106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Saccharofermentanales
Family
Fastidiosipilaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.