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Cluster: CGMR050420_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_56179 k141_56179_4 2555 3289 - 3.A.1.4.10
TC k141_56179 k141_56179_5 3286 4122 - 3.A.1.4.10
TC k141_56179 k141_56179_6 4137 5306 - 3.A.1.4.10
TC k141_56179 k141_56179_7 5315 6202 - 3.A.1.4.10
TC k141_56179 k141_56179_8 6277 7461 - 3.A.1.4.10
pfam k141_56179 k141_56179_9 7647 8678 - Phage_integrase
pfam k141_56179 k141_56179_10 8767 9852 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme k141_56179 k141_56179_11 9867 12137 + GH2
pfam k141_56179 k141_56179_12 12483 13505 + 2-Hacid_dh_C
TC k141_56179 k141_56179_13 13508 14692 + 2.A.4.1.3
Gene ID: k141_56179_4
Type: TC
Location: 2555 - 3289 (-)
Gene ID: k141_56179_5
Type: TC
Location: 3286 - 4122 (-)
Gene ID: k141_56179_6
Type: TC
Location: 4137 - 5306 (-)
Gene ID: k141_56179_7
Type: TC
Location: 5315 - 6202 (-)
Gene ID: k141_56179_8
Type: TC
Location: 6277 - 7461 (-)
Gene ID: k141_56179_9
Type: pfam
Location: 7647 - 8678 (-)
Gene ID: k141_56179_10
Type: pfam
Location: 8767 - 9852 (+)
Gene ID: k141_56179_11
Type: CAZyme
Location: 9867 - 12137 (+)
Gene ID: k141_56179_12
Type: pfam
Location: 12483 - 13505 (+)
Gene ID: k141_56179_13
Type: TC
Location: 13508 - 14692 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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