Cluster: CGMR050420_CGC29
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR050420
- CGC Family ID: CGCFAM_08659
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_51930 | k141_51930_1 | 246 | 1130 | - | 3.A.1.1.11 |
| TC | k141_51930 | k141_51930_2 | 1120 | 2001 | - | 3.A.1.1.7 |
| STP | k141_51930 | k141_51930_3 | 2084 | 3493 | - | SBP_bac_1 |
| CAZyme | k141_51930 | k141_51930_4 | 3573 | 4808 | - | GH109 |
| CAZyme | k141_51930 | k141_51930_5 | 4839 | 6071 | - | CE9 |
| pfam | k141_51930 | k141_51930_6 | 6094 | 6843 | - | Glucosamine_iso |
| TF | k141_51930 | k141_51930_7 | 7034 | 7915 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_51930 | k141_51930_8 | 7930 | 9159 | - | GH177 |
Gene ID: k141_51930_1
Type: TC
Location: 246 - 1130 (-)
Type: TC
Location: 246 - 1130 (-)
Gene ID: k141_51930_2
Type: TC
Location: 1120 - 2001 (-)
Type: TC
Location: 1120 - 2001 (-)
Gene ID: k141_51930_3
Type: STP
Location: 2084 - 3493 (-)
Type: STP
Location: 2084 - 3493 (-)
Gene ID: k141_51930_4
Type: CAZyme
Location: 3573 - 4808 (-)
Type: CAZyme
Location: 3573 - 4808 (-)
Gene ID: k141_51930_5
Type: CAZyme
Location: 4839 - 6071 (-)
Type: CAZyme
Location: 4839 - 6071 (-)
Gene ID: k141_51930_6
Type: pfam
Location: 6094 - 6843 (-)
Type: pfam
Location: 6094 - 6843 (-)
Gene ID: k141_51930_7
Type: TF
Location: 7034 - 7915 (+)
Type: TF
Location: 7034 - 7915 (+)
Gene ID: k141_51930_8
Type: CAZyme
Location: 7930 - 9159 (-)
Type: CAZyme
Location: 7930 - 9159 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Saccharofermentanales
Family
Fastidiosipilaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.