Cluster: CGMR050420_CGC28
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR050420
- CGC Family ID: CGCFAM_07328
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_24279 | k141_24279_2 | 640 | 2406 | + | 3.A.1.106.8 |
| TC | k141_24279 | k141_24279_3 | 2399 | 4222 | + | 3.A.1.106.8 |
| NULL(UNKNOWN) | k141_24279 | k141_24279_4 | 4279 | 4800 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_24279 | k141_24279_5 | 4793 | 7207 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_24279 | k141_24279_6 | 7218 | 8585 | - | GH29 |
| TF | k141_24279 | k141_24279_7 | 8611 | 9627 | - | HTH_11 |
| TC | k141_24279 | k141_24279_8 | 9982 | 10923 | + | 3.A.1.1.10 |
| TC | k141_24279 | k141_24279_9 | 10935 | 11846 | + | 3.A.1.1.10 |
Gene ID: k141_24279_2
Type: TC
Location: 640 - 2406 (+)
Type: TC
Location: 640 - 2406 (+)
Gene ID: k141_24279_3
Type: TC
Location: 2399 - 4222 (+)
Type: TC
Location: 2399 - 4222 (+)
Gene ID: k141_24279_4
Type:
Location: 4279 - 4800 (-)
Type:
Location: 4279 - 4800 (-)
Gene ID: k141_24279_5
Type:
Location: 4793 - 7207 (-)
Type:
Location: 4793 - 7207 (-)
Gene ID: k141_24279_6
Type: CAZyme
Location: 7218 - 8585 (-)
Type: CAZyme
Location: 7218 - 8585 (-)
Gene ID: k141_24279_7
Type: TF
Location: 8611 - 9627 (-)
Type: TF
Location: 8611 - 9627 (-)
Gene ID: k141_24279_8
Type: TC
Location: 9982 - 10923 (+)
Type: TC
Location: 9982 - 10923 (+)
Gene ID: k141_24279_9
Type: TC
Location: 10935 - 11846 (+)
Type: TC
Location: 10935 - 11846 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Saccharofermentanales
Family
Fastidiosipilaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.