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Cluster: CGMR050420_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_224539 k141_224539_2 1053 2375 + GH4
pfam k141_224539 k141_224539_3 2664 4739 + GTP_EFTU | EFG_C | MMR_HSR1 | GTP_EFTU_D2 | EFG_IV | EFG_III | EF-G_D2
NULL(UNKNOWN) k141_224539 k141_224539_4 4816 5655 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_224539 k141_224539_5 5697 6614 + 8.A.5.1.7
NULL(UNKNOWN) k141_224539 k141_224539_6 6663 8711 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_224539 k141_224539_7 8722 9651 - GT2
NULL(UNKNOWN) k141_224539 k141_224539_8 10723 11370 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_224539 k141_224539_9 11590 12618 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_224539 k141_224539_10 12615 13289 + 3.A.1.122.2
pfam k141_224539 k141_224539_11 13419 14435 + PBP_like_2 | PBP_like_2
TC k141_224539 k141_224539_12 14432 15073 + 3.A.1.7.5
Gene ID: k141_224539_2
Type: CAZyme
Location: 1053 - 2375 (+)
Gene ID: k141_224539_3
Type: pfam
Location: 2664 - 4739 (+)
Gene ID: k141_224539_4
Type:
Location: 4816 - 5655 (+)
Gene ID: k141_224539_5
Type: TC
Location: 5697 - 6614 (+)
Gene ID: k141_224539_6
Type:
Location: 6663 - 8711 (-)
Gene ID: k141_224539_7
Type: CAZyme
Location: 8722 - 9651 (-)
Gene ID: k141_224539_8
Type:
Location: 10723 - 11370 (+)
Gene ID: k141_224539_9
Type:
Location: 11590 - 12618 (+)
Gene ID: k141_224539_10
Type: TC
Location: 12615 - 13289 (+)
Gene ID: k141_224539_11
Type: pfam
Location: 13419 - 14435 (+)
Gene ID: k141_224539_12
Type: TC
Location: 14432 - 15073 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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