Cluster: CGMR050403_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR050403
- CGC Family ID: CGCFAM_00701
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_29861 | k141_29861_38 | 32068 | 33453 | - | 2.A.47.5.2 |
| TC | k141_29861 | k141_29861_39 | 33609 | 34835 | - | 2.A.1.12.1 |
| TF | k141_29861 | k141_29861_40 | 35010 | 35720 | + | GntR |
| pfam | k141_29861 | k141_29861_41 | 35710 | 36783 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3 |
| CAZyme | k141_29861 | k141_29861_42 | 36794 | 37900 | + | GH177 |
Gene ID: k141_29861_38
Type: TC
Location: 32068 - 33453 (-)
Type: TC
Location: 32068 - 33453 (-)
Gene ID: k141_29861_39
Type: TC
Location: 33609 - 34835 (-)
Type: TC
Location: 33609 - 34835 (-)
Gene ID: k141_29861_40
Type: TF
Location: 35010 - 35720 (+)
Type: TF
Location: 35010 - 35720 (+)
Gene ID: k141_29861_41
Type: pfam
Location: 35710 - 36783 (+)
Type: pfam
Location: 35710 - 36783 (+)
Gene ID: k141_29861_42
Type: CAZyme
Location: 36794 - 37900 (+)
Type: CAZyme
Location: 36794 - 37900 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900764435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.