Cluster: CGMR050403_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR050403
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_21302 | k141_21302_23 | 19063 | 20091 | + | GT9 |
| TC | k141_21302 | k141_21302_24 | 20041 | 20706 | - | 2.A.115.2.7 |
| pfam | k141_21302 | k141_21302_25 | 20897 | 22438 | + | PFL-like | YjjI-like |
| TC | k141_21302 | k141_21302_26 | 22480 | 24345 | - | 2.A.16.2.2 |
| TC | k141_21302 | k141_21302_27 | 24345 | 24650 | - | 9.B.21.2.1 |
Gene ID: k141_21302_23
Type: CAZyme
Location: 19063 - 20091 (+)
Type: CAZyme
Location: 19063 - 20091 (+)
Gene ID: k141_21302_24
Type: TC
Location: 20041 - 20706 (-)
Type: TC
Location: 20041 - 20706 (-)
Gene ID: k141_21302_25
Type: pfam
Location: 20897 - 22438 (+)
Type: pfam
Location: 20897 - 22438 (+)
Gene ID: k141_21302_26
Type: TC
Location: 22480 - 24345 (-)
Type: TC
Location: 22480 - 24345 (-)
Gene ID: k141_21302_27
Type: TC
Location: 24345 - 24650 (-)
Type: TC
Location: 24345 - 24650 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900764435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_21302_23 | vegan > omnivore | 1.15762 | 0.00732 |
| k141_21302_24 | vegan > omnivore | 1.45668 | 0.00732 |
| k141_21302_24 | vegetarian > omnivore | 1.58949 | 0.00500 |