Cluster: CGMR050403_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR050403
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_31059 | k141_31059_165 | 159878 | 160264 | - | 1.A.22.1.1 |
| TC | k141_31059 | k141_31059_166 | 160343 | 161719 | - | 2.A.38.1.1 |
| CAZyme | k141_31059 | k141_31059_167 | 161716 | 162531 | - | GT2 |
Gene ID: k141_31059_165
Type: TC
Location: 159878 - 160264 (-)
Type: TC
Location: 159878 - 160264 (-)
Gene ID: k141_31059_166
Type: TC
Location: 160343 - 161719 (-)
Type: TC
Location: 160343 - 161719 (-)
Gene ID: k141_31059_167
Type: CAZyme
Location: 161716 - 162531 (-)
Type: CAZyme
Location: 161716 - 162531 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900764435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_31059_165 | vegan > omnivore | 2.06170 | 0.00732 |
| k141_31059_165 | vegetarian > omnivore | 4.20943 | 0.00500 |
| k141_31059_166 | vegetarian > omnivore | 1.18162 | 0.00500 |
| k141_31059_167 | vegan > omnivore | 1.91971 | 0.00732 |
| k141_31059_167 | vegetarian > omnivore | 1.07436 | 0.00500 |