Cluster: CGMR050403_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR050403
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_31140 | k141_31140_70 | 69428 | 70882 | + | GH32 |
| pfam | k141_31140 | k141_31140_71 | 70892 | 71509 | + | Y_phosphatase | DSPc | Y_phosphatase2 | Y_phosphatase3 | PTP-NADK | Tc-R-P |
| TC | k141_31140 | k141_31140_72 | 71587 | 72759 | + | 2.A.1.20.4 |
Gene ID: k141_31140_70
Type: CAZyme
Location: 69428 - 70882 (+)
Type: CAZyme
Location: 69428 - 70882 (+)
Gene ID: k141_31140_71
Type: pfam
Location: 70892 - 71509 (+)
Type: pfam
Location: 70892 - 71509 (+)
Gene ID: k141_31140_72
Type: TC
Location: 71587 - 72759 (+)
Type: TC
Location: 71587 - 72759 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900764435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_31140_70 | vegan > omnivore | 1.34483 | 0.00732 |