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Cluster: CGMR050403_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_31140 k141_31140_20 20406 21179 - 3.A.1.14.19
TC k141_31140 k141_31140_21 21179 22228 - 3.A.1.14.5
STP k141_31140 k141_31140_22 22244 23359 - Peripla_BP_2
pfam k141_31140 k141_31140_23 23458 24597 - CCP_MauG
CAZyme k141_31140 k141_31140_24 24677 25795 - GH103
CAZyme k141_31140 k141_31140_25 25829 26632 - GT2
CAZyme k141_31140 k141_31140_26 26655 27536 - GT2
NULL(UNKNOWN) k141_31140 k141_31140_27 27529 28728 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_31140 k141_31140_28 28736 29506 - GT25
Gene ID: k141_31140_20
Type: TC
Location: 20406 - 21179 (-)
Gene ID: k141_31140_21
Type: TC
Location: 21179 - 22228 (-)
Gene ID: k141_31140_22
Type: STP
Location: 22244 - 23359 (-)
Gene ID: k141_31140_23
Type: pfam
Location: 23458 - 24597 (-)
Gene ID: k141_31140_24
Type: CAZyme
Location: 24677 - 25795 (-)
Gene ID: k141_31140_25
Type: CAZyme
Location: 25829 - 26632 (-)
Gene ID: k141_31140_26
Type: CAZyme
Location: 26655 - 27536 (-)
Gene ID: k141_31140_27
Type:
Location: 27529 - 28728 (-)
Gene ID: k141_31140_28
Type: CAZyme
Location: 28736 - 29506 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_31140_22 vegan > omnivore 2.04231 0.00732
k141_31140_22 vegetarian > omnivore 1.31275 0.00500
k141_31140_26 vegetarian > omnivore 2.85644 0.00500
k141_31140_26 vegetarian > vegan 2.18337 0.01357

🧭 Explore Read Mapping of CGC

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