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Cluster: CGMR050403_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_31140 k141_31140_8 7782 10181 + GT51
TC k141_31140 k141_31140_9 10400 12304 + 2.A.108.2.10
TC k141_31140 k141_31140_10 12333 12854 + 2.A.108.2.10
pfam k141_31140 k141_31140_11 12970 14364 + YHS | FtrD-like
TC k141_31140 k141_31140_12 14364 15704 + 3.A.1.122.8
pfam k141_31140 k141_31140_13 15691 16824 + FtsX | MacB_PCD
TC k141_31140 k141_31140_14 16826 17497 + 3.A.1.122.8
Gene ID: k141_31140_8
Type: CAZyme
Location: 7782 - 10181 (+)
Gene ID: k141_31140_9
Type: TC
Location: 10400 - 12304 (+)
Gene ID: k141_31140_10
Type: TC
Location: 12333 - 12854 (+)
Gene ID: k141_31140_11
Type: pfam
Location: 12970 - 14364 (+)
Gene ID: k141_31140_12
Type: TC
Location: 14364 - 15704 (+)
Gene ID: k141_31140_13
Type: pfam
Location: 15691 - 16824 (+)
Gene ID: k141_31140_14
Type: TC
Location: 16826 - 17497 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_31140_9 vegetarian > vegan 1.11896 0.01357
k141_31140_11 vegetarian > vegan 1.88183 0.01357

🧭 Explore Read Mapping of CGC

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