Cluster: CGMR050403_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR050403
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_32748 | k141_32748_38 | 43187 | 44305 | - | 1.B.1.3.3 |
| CAZyme | k141_32748 | k141_32748_39 | 44471 | 45424 | - | GT9 |
| TC | k141_32748 | k141_32748_40 | 45421 | 46326 | - | 2.A.7.3.58 |
| NULL(UNKNOWN) | k141_32748 | k141_32748_41 | 46356 | 46940 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_32748 | k141_32748_42 | 46958 | 48001 | - | GT9 |
Gene ID: k141_32748_38
Type: TC
Location: 43187 - 44305 (-)
Type: TC
Location: 43187 - 44305 (-)
Gene ID: k141_32748_39
Type: CAZyme
Location: 44471 - 45424 (-)
Type: CAZyme
Location: 44471 - 45424 (-)
Gene ID: k141_32748_40
Type: TC
Location: 45421 - 46326 (-)
Type: TC
Location: 45421 - 46326 (-)
Gene ID: k141_32748_41
Type:
Location: 46356 - 46940 (-)
Type:
Location: 46356 - 46940 (-)
Gene ID: k141_32748_42
Type: CAZyme
Location: 46958 - 48001 (-)
Type: CAZyme
Location: 46958 - 48001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900764435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_32748_39 | vegan > omnivore | 1.34876 | 0.00732 |
| k141_32748_39 | vegetarian > omnivore | 1.44171 | 0.00500 |