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Cluster: CGMR050403_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_32748 k141_32748_1 1 2208 - 1.B.40.2.2
TC k141_32748 k141_32748_2 2614 3783 + 8.A.1.1.1
TC k141_32748 k141_32748_3 3792 5318 + 2.A.1.3.2
pfam k141_32748 k141_32748_4 5374 8205 - UvrA_DNA-bind | UvrA_inter
pfam k141_32748 k141_32748_5 8368 8835 + SSB
CAZyme k141_32748 k141_32748_6 8929 10470 - AA1
pfam k141_32748 k141_32748_7 10482 10937 - DUF411
NULL(UNKNOWN) k141_32748 k141_32748_8 11807 12397 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_32748 k141_32748_9 12621 13415 + 1.A.16.2.1
Gene ID: k141_32748_1
Type: TC
Location: 1 - 2208 (-)
Gene ID: k141_32748_2
Type: TC
Location: 2614 - 3783 (+)
Gene ID: k141_32748_3
Type: TC
Location: 3792 - 5318 (+)
Gene ID: k141_32748_4
Type: pfam
Location: 5374 - 8205 (-)
Gene ID: k141_32748_5
Type: pfam
Location: 8368 - 8835 (+)
Gene ID: k141_32748_6
Type: CAZyme
Location: 8929 - 10470 (-)
Gene ID: k141_32748_7
Type: pfam
Location: 10482 - 10937 (-)
Gene ID: k141_32748_8
Type:
Location: 11807 - 12397 (+)
Gene ID: k141_32748_9
Type: TC
Location: 12621 - 13415 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_32748_3 vegan > omnivore 1.33244 0.00732
k141_32748_3 vegetarian > omnivore 2.37612 0.00500
k141_32748_5 vegan > omnivore 2.66401 0.00732
k141_32748_8 vegetarian > omnivore 2.67740 0.00500
k141_32748_8 vegetarian > vegan 2.42668 0.00688

🧭 Explore Read Mapping of CGC

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