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Cluster: CGMR050403_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_18843 k141_18843_21 16087 16968 + 3.A.1.15.4
TC k141_18843 k141_18843_22 16968 17864 + 3.A.1.15.4
TC k141_18843 k141_18843_23 17868 18719 + 3.A.1.15.4
TC k141_18843 k141_18843_24 18712 19545 + 3.A.1.15.4
pfam k141_18843 k141_18843_25 19580 20752 - MTS | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
CAZyme k141_18843 k141_18843_26 20749 21792 - GH3
Gene ID: k141_18843_21
Type: TC
Location: 16087 - 16968 (+)
Gene ID: k141_18843_22
Type: TC
Location: 16968 - 17864 (+)
Gene ID: k141_18843_23
Type: TC
Location: 17868 - 18719 (+)
Gene ID: k141_18843_24
Type: TC
Location: 18712 - 19545 (+)
Gene ID: k141_18843_25
Type: pfam
Location: 19580 - 20752 (-)
Gene ID: k141_18843_26
Type: CAZyme
Location: 20749 - 21792 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_18843_23 vegan > omnivore 2.55055 0.00732
k141_18843_23 vegetarian > omnivore 1.26834 0.00500
k141_18843_24 vegan > omnivore 2.38317 0.00732
k141_18843_24 vegetarian > omnivore 1.43224 0.00500
k141_18843_25 vegan > omnivore 1.23474 0.00732
k141_18843_25 vegetarian > omnivore 1.26160 0.00500

🧭 Explore Read Mapping of CGC

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