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Cluster: CGMR050395_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23634 k141_23634_3 2868 4475 + 3.A.1.5.27
TC k141_23634 k141_23634_4 4585 5604 + 3.A.1.5.39
TC k141_23634 k141_23634_5 5614 6513 + 3.A.1.5.27
TC k141_23634 k141_23634_6 6524 7507 + 3.A.1.5.27
TC k141_23634 k141_23634_7 7504 8520 + 3.A.1.5.27
pfam k141_23634 k141_23634_8 8914 9492 + CBP_BcsO
STP k141_23634 k141_23634_9 9483 10286 + CbiA
CAZyme k141_23634 k141_23634_10 10304 12433 + GT2
TC k141_23634 k141_23634_11 12430 14958 + 4.D.3.1.6
TC k141_23634 k141_23634_12 14958 18995 + 1.B.55.3.1
pfam k141_23634 k141_23634_13 18997 19473 + Cellsynth_D
CAZyme k141_23634 k141_23634_14 19483 20475 + GH8
Gene ID: k141_23634_3
Type: TC
Location: 2868 - 4475 (+)
Gene ID: k141_23634_4
Type: TC
Location: 4585 - 5604 (+)
Gene ID: k141_23634_5
Type: TC
Location: 5614 - 6513 (+)
Gene ID: k141_23634_6
Type: TC
Location: 6524 - 7507 (+)
Gene ID: k141_23634_7
Type: TC
Location: 7504 - 8520 (+)
Gene ID: k141_23634_8
Type: pfam
Location: 8914 - 9492 (+)
Gene ID: k141_23634_9
Type: STP
Location: 9483 - 10286 (+)
Gene ID: k141_23634_10
Type: CAZyme
Location: 10304 - 12433 (+)
Gene ID: k141_23634_11
Type: TC
Location: 12430 - 14958 (+)
Gene ID: k141_23634_12
Type: TC
Location: 14958 - 18995 (+)
Gene ID: k141_23634_13
Type: pfam
Location: 18997 - 19473 (+)
Gene ID: k141_23634_14
Type: CAZyme
Location: 19483 - 20475 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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