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Cluster: CGMR050395_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_141697 k141_141697_17 16449 16832 - 2.A.7.22.1
TC k141_141697 k141_141697_18 16832 17155 - 2.A.7.22.2
CAZyme k141_141697 k141_141697_19 17152 18813 - GT83
pfam k141_141697 k141_141697_20 18818 19714 - Polysacc_deac_1
pfam k141_141697 k141_141697_21 19711 21693 - Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme k141_141697 k141_141697_22 21693 22673 - GT2
STP k141_141697 k141_141697_23 22679 23818 - Aminotran_1_2
TC k141_141697 k141_141697_24 24511 26229 + 3.A.1.120.5
pfam k141_141697 k141_141697_25 26442 27452 + ADH_zinc_N | ADH_N | ADH_zinc_N_2
TC k141_141697 k141_141697_26 27488 28657 - 2.A.1.2.14
TC k141_141697 k141_141697_27 28824 29480 - 5.A.3.2.1
TC k141_141697 k141_141697_28 29473 30357 - 5.A.3.2.1
TC k141_141697 k141_141697_29 30369 32780 - 5.A.3.2.1
TC k141_141697 k141_141697_30 32829 33416 - 5.A.3.2.1
TC k141_141697 k141_141697_31 33688 34512 + 2.A.7.17.1
TC k141_141697 k141_141697_32 34555 36069 - 2.A.1.3.14
STP k141_141697 k141_141697_33 36184 36762 + TetR_N
TC k141_141697 k141_141697_34 36933 38324 + 2.A.1.8.10
TC k141_141697 k141_141697_35 38386 42126 + 5.A.3.1.2
TC k141_141697 k141_141697_36 42123 43667 + 5.A.3.1.2
pfam k141_141697 k141_141697_37 43667 44362 + Nitrate_red_del
TC k141_141697 k141_141697_38 44359 45039 + 5.A.3.1.2
Gene ID: k141_141697_17
Type: TC
Location: 16449 - 16832 (-)
Gene ID: k141_141697_18
Type: TC
Location: 16832 - 17155 (-)
Gene ID: k141_141697_19
Type: CAZyme
Location: 17152 - 18813 (-)
Gene ID: k141_141697_20
Type: pfam
Location: 18818 - 19714 (-)
Gene ID: k141_141697_21
Type: pfam
Location: 19711 - 21693 (-)
Gene ID: k141_141697_22
Type: CAZyme
Location: 21693 - 22673 (-)
Gene ID: k141_141697_23
Type: STP
Location: 22679 - 23818 (-)
Gene ID: k141_141697_24
Type: TC
Location: 24511 - 26229 (+)
Gene ID: k141_141697_25
Type: pfam
Location: 26442 - 27452 (+)
Gene ID: k141_141697_26
Type: TC
Location: 27488 - 28657 (-)
Gene ID: k141_141697_27
Type: TC
Location: 28824 - 29480 (-)
Gene ID: k141_141697_28
Type: TC
Location: 29473 - 30357 (-)
Gene ID: k141_141697_29
Type: TC
Location: 30369 - 32780 (-)
Gene ID: k141_141697_30
Type: TC
Location: 32829 - 33416 (-)
Gene ID: k141_141697_31
Type: TC
Location: 33688 - 34512 (+)
Gene ID: k141_141697_32
Type: TC
Location: 34555 - 36069 (-)
Gene ID: k141_141697_33
Type: STP
Location: 36184 - 36762 (+)
Gene ID: k141_141697_34
Type: TC
Location: 36933 - 38324 (+)
Gene ID: k141_141697_35
Type: TC
Location: 38386 - 42126 (+)
Gene ID: k141_141697_36
Type: TC
Location: 42123 - 43667 (+)
Gene ID: k141_141697_37
Type: pfam
Location: 43667 - 44362 (+)
Gene ID: k141_141697_38
Type: TC
Location: 44359 - 45039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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