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Cluster: CGMR050395_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_74478 k141_74478_3 5163 7343 + 3.A.1.109.4
TC k141_74478 k141_74478_4 7324 8574 + 3.A.1.109.4
CAZyme k141_74478 k141_74478_5 8574 11630 + GT4
pfam k141_74478 k141_74478_6 11669 12019 - DsrE
peptidase k141_74478 k141_74478_7 12069 12620 - I51.UPW
TC k141_74478 k141_74478_8 12841 14178 + 1.B.54.1.9
TF k141_74478 k141_74478_9 14175 14825 - GerE
STP k141_74478 k141_74478_10 14818 16614 - HATPase_c
TC k141_74478 k141_74478_11 16924 18312 + 2.A.1.8.1
TC k141_74478 k141_74478_12 18648 22391 + 5.A.3.1.1
TC k141_74478 k141_74478_13 22388 23923 + 5.A.3.1.1
pfam k141_74478 k141_74478_14 23920 24630 + Nitrate_red_del
TC k141_74478 k141_74478_15 24630 25307 + 5.A.3.1.1
Gene ID: k141_74478_3
Type: TC
Location: 5163 - 7343 (+)
Gene ID: k141_74478_4
Type: TC
Location: 7324 - 8574 (+)
Gene ID: k141_74478_5
Type: CAZyme
Location: 8574 - 11630 (+)
Gene ID: k141_74478_6
Type: pfam
Location: 11669 - 12019 (-)
Gene ID: k141_74478_7
Type: peptidase
Location: 12069 - 12620 (-)
Gene ID: k141_74478_8
Type: TC
Location: 12841 - 14178 (+)
Gene ID: k141_74478_9
Type: TF
Location: 14175 - 14825 (-)
Gene ID: k141_74478_10
Type: STP
Location: 14818 - 16614 (-)
Gene ID: k141_74478_11
Type: TC
Location: 16924 - 18312 (+)
Gene ID: k141_74478_12
Type: TC
Location: 18648 - 22391 (+)
Gene ID: k141_74478_13
Type: TC
Location: 22388 - 23923 (+)
Gene ID: k141_74478_14
Type: pfam
Location: 23920 - 24630 (+)
Gene ID: k141_74478_15
Type: TC
Location: 24630 - 25307 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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