Cluster: CGMR050395_CGC54
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR050395
- CGC Family ID: CGCFAM_02529
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_27265 | k141_27265_11 | 12169 | 13359 | - | GH88 |
| TC | k141_27265 | k141_27265_12 | 13380 | 14645 | - | 2.A.1.5.4 |
| CAZyme | k141_27265 | k141_27265_13 | 14677 | 16458 | - | GH154 |
| TF | k141_27265 | k141_27265_14 | 16643 | 17503 | + | HTH_AraC | HTH_AraC |
| pfam | k141_27265 | k141_27265_15 | 17538 | 17993 | + | DUF1269 |
| TC | k141_27265 | k141_27265_16 | 17997 | 19415 | - | 2.A.1.1.113 |
Gene ID: k141_27265_11
Type: CAZyme
Location: 12169 - 13359 (-)
Type: CAZyme
Location: 12169 - 13359 (-)
Gene ID: k141_27265_12
Type: TC
Location: 13380 - 14645 (-)
Type: TC
Location: 13380 - 14645 (-)
Gene ID: k141_27265_13
Type: CAZyme
Location: 14677 - 16458 (-)
Type: CAZyme
Location: 14677 - 16458 (-)
Gene ID: k141_27265_14
Type: TF
Location: 16643 - 17503 (+)
Type: TF
Location: 16643 - 17503 (+)
Gene ID: k141_27265_15
Type: pfam
Location: 17538 - 17993 (+)
Type: pfam
Location: 17538 - 17993 (+)
Gene ID: k141_27265_16
Type: TC
Location: 17997 - 19415 (-)
Type: TC
Location: 17997 - 19415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pluralibacter
Species
Pluralibacter gergoviae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.