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Cluster: CGMR050395_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_69768 k141_69768_26 24974 27271 + GH3
TC k141_69768 k141_69768_27 27417 28325 + 3.A.1.12.15
TC k141_69768 k141_69768_28 28329 29486 + 3.A.1.12.15
TC k141_69768 k141_69768_29 29479 30411 + 3.A.1.12.15
TC k141_69768 k141_69768_30 30408 31145 + 3.A.1.12.15
NULL(UNKNOWN) k141_69768 k141_69768_31 31120 31233 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_69768 k141_69768_32 31455 33140 + 9.B.33.1.1
TF k141_69768 k141_69768_33 33137 33862 + LytTR
pfam k141_69768 k141_69768_34 33908 34375 + DUF1456 | DUF1456
TC k141_69768 k141_69768_35 34662 35087 + 2.A.1.36.3
Gene ID: k141_69768_26
Type: CAZyme
Location: 24974 - 27271 (+)
Gene ID: k141_69768_27
Type: TC
Location: 27417 - 28325 (+)
Gene ID: k141_69768_28
Type: TC
Location: 28329 - 29486 (+)
Gene ID: k141_69768_29
Type: TC
Location: 29479 - 30411 (+)
Gene ID: k141_69768_30
Type: TC
Location: 30408 - 31145 (+)
Gene ID: k141_69768_31
Type:
Location: 31120 - 31233 (-)
Gene ID: k141_69768_32
Type: TC
Location: 31455 - 33140 (+)
Gene ID: k141_69768_33
Type: TF
Location: 33137 - 33862 (+)
Gene ID: k141_69768_34
Type: pfam
Location: 33908 - 34375 (+)
Gene ID: k141_69768_35
Type: TC
Location: 34662 - 35087 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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