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Cluster: CGMR050395_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_43446 k141_43446_29 25752 26354 + 5.B.5.1.2
TC k141_43446 k141_43446_30 26565 27872 + 2.A.2.3.6
pfam k141_43446 k141_43446_31 27914 28825 + IU_nuc_hydro
TF k141_43446 k141_43446_32 28806 29834 + HTH_5
TC k141_43446 k141_43446_33 30457 31596 + 2.A.6.2.6
TC k141_43446 k141_43446_34 31607 34756 + 2.A.6.2.6
TC k141_43446 k141_43446_35 34749 36152 + 2.A.6.2.18
TF k141_43446 k141_43446_36 36153 37040 - HTH_1
TC k141_43446 k141_43446_37 37209 38483 - 2.A.36.3.1
CAZyme k141_43446 k141_43446_38 39138 40229 + GT4
Gene ID: k141_43446_29
Type: TC
Location: 25752 - 26354 (+)
Gene ID: k141_43446_30
Type: TC
Location: 26565 - 27872 (+)
Gene ID: k141_43446_31
Type: pfam
Location: 27914 - 28825 (+)
Gene ID: k141_43446_32
Type: TF
Location: 28806 - 29834 (+)
Gene ID: k141_43446_33
Type: TC
Location: 30457 - 31596 (+)
Gene ID: k141_43446_34
Type: TC
Location: 31607 - 34756 (+)
Gene ID: k141_43446_35
Type: TC
Location: 34749 - 36152 (+)
Gene ID: k141_43446_36
Type: TF
Location: 36153 - 37040 (-)
Gene ID: k141_43446_37
Type: TC
Location: 37209 - 38483 (-)
Gene ID: k141_43446_38
Type: CAZyme
Location: 39138 - 40229 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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