Cluster: CGMR050395_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR050395
- CGC Family ID: CGCFAM_00123
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_171935 | k141_171935_3 | 3414 | 5861 | - | GT35 |
| CAZyme | k141_171935 | k141_171935_4 | 5878 | 7311 | - | GT5 |
| pfam | k141_171935 | k141_171935_5 | 7323 | 8606 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | k141_171935 | k141_171935_6 | 8609 | 10594 | - | CBM48 | GH13_11 |
| CAZyme | k141_171935 | k141_171935_7 | 10591 | 12777 | - | CBM48 | GH13_9 |
| pfam | k141_171935 | k141_171935_8 | 13027 | 14133 | - | Semialdhyde_dh | Semialdhyde_dhC |
| TC | k141_171935 | k141_171935_9 | 14342 | 14935 | + | 2.A.95.1.5 |
| pfam | k141_171935 | k141_171935_10 | 14913 | 15644 | - | PapD_N |
| pfam | k141_171935 | k141_171935_11 | 15641 | 16960 | - | Fimbrial |
| TC | k141_171935 | k141_171935_12 | 16967 | 19471 | - | 1.B.11.3.7 |
| pfam | k141_171935 | k141_171935_13 | 19487 | 20191 | - | PapD_N | PapD_C |
| pfam | k141_171935 | k141_171935_14 | 20248 | 20805 | - | Fimbrial | FimA |
| TC | k141_171935 | k141_171935_15 | 21082 | 22425 | - | 2.A.8.1.8 |
Gene ID: k141_171935_3
Type: CAZyme
Location: 3414 - 5861 (-)
Type: CAZyme
Location: 3414 - 5861 (-)
Gene ID: k141_171935_4
Type: CAZyme
Location: 5878 - 7311 (-)
Type: CAZyme
Location: 5878 - 7311 (-)
Gene ID: k141_171935_5
Type: pfam
Location: 7323 - 8606 (-)
Type: pfam
Location: 7323 - 8606 (-)
Gene ID: k141_171935_6
Type: CAZyme
Location: 8609 - 10594 (-)
Type: CAZyme
Location: 8609 - 10594 (-)
Gene ID: k141_171935_7
Type: CAZyme
Location: 10591 - 12777 (-)
Type: CAZyme
Location: 10591 - 12777 (-)
Gene ID: k141_171935_8
Type: pfam
Location: 13027 - 14133 (-)
Type: pfam
Location: 13027 - 14133 (-)
Gene ID: k141_171935_9
Type: TC
Location: 14342 - 14935 (+)
Type: TC
Location: 14342 - 14935 (+)
Gene ID: k141_171935_10
Type: pfam
Location: 14913 - 15644 (-)
Type: pfam
Location: 14913 - 15644 (-)
Gene ID: k141_171935_11
Type: pfam
Location: 15641 - 16960 (-)
Type: pfam
Location: 15641 - 16960 (-)
Gene ID: k141_171935_12
Type: TC
Location: 16967 - 19471 (-)
Type: TC
Location: 16967 - 19471 (-)
Gene ID: k141_171935_13
Type: pfam
Location: 19487 - 20191 (-)
Type: pfam
Location: 19487 - 20191 (-)
Gene ID: k141_171935_14
Type: pfam
Location: 20248 - 20805 (-)
Type: pfam
Location: 20248 - 20805 (-)
Gene ID: k141_171935_15
Type: TC
Location: 21082 - 22425 (-)
Type: TC
Location: 21082 - 22425 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pluralibacter
Species
Pluralibacter gergoviae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.