Cluster: CGMR050395_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: chitin
- Genome ID: CGMR050395
- CGC Family ID: CGCFAM_00218
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_109840 | k141_109840_54 | 57888 | 59234 | - | GH4 |
| TF | k141_109840 | k141_109840_55 | 59335 | 60162 | - | HTH_AraC |
| TC | k141_109840 | k141_109840_56 | 60193 | 60540 | - | 4.A.3.2.7 |
| TC | k141_109840 | k141_109840_57 | 60592 | 61950 | - | 4.A.3.2.7 |
| TC | k141_109840 | k141_109840_58 | 62041 | 62361 | - | 4.A.3.2.1 |
Gene ID: k141_109840_54
Type: CAZyme
Location: 57888 - 59234 (-)
Type: CAZyme
Location: 57888 - 59234 (-)
Gene ID: k141_109840_55
Type: TF
Location: 59335 - 60162 (-)
Type: TF
Location: 59335 - 60162 (-)
Gene ID: k141_109840_56
Type: TC
Location: 60193 - 60540 (-)
Type: TC
Location: 60193 - 60540 (-)
Gene ID: k141_109840_57
Type: TC
Location: 60592 - 61950 (-)
Type: TC
Location: 60592 - 61950 (-)
Gene ID: k141_109840_58
Type: TC
Location: 62041 - 62361 (-)
Type: TC
Location: 62041 - 62361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pluralibacter
Species
Pluralibacter gergoviae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.