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Cluster: CGMR050395_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_21846 k141_21846_105 110385 111539 - CE9
pfam k141_21846 k141_21846_106 111598 112398 - Glucosamine_iso
TC k141_21846 k141_21846_107 112763 114751 + 4.A.1.1.2
pfam k141_21846 k141_21846_108 114919 116586 + tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
pfam k141_21846 k141_21846_109 116638 117372 - adh_short | adh_short_C2
TC k141_21846 k141_21846_110 117592 118935 + 1.B.19.1.1
TC k141_21846 k141_21846_111 119313 120719 + 1.B.25.1.13
pfam k141_21846 k141_21846_112 120769 121101 + YbfN
TC k141_21846 k141_21846_113 121142 122437 - 2.A.1.6.7
Gene ID: k141_21846_105
Type: CAZyme
Location: 110385 - 111539 (-)
Gene ID: k141_21846_106
Type: pfam
Location: 111598 - 112398 (-)
Gene ID: k141_21846_107
Type: TC
Location: 112763 - 114751 (+)
Gene ID: k141_21846_108
Type: pfam
Location: 114919 - 116586 (+)
Gene ID: k141_21846_109
Type: pfam
Location: 116638 - 117372 (-)
Gene ID: k141_21846_110
Type: TC
Location: 117592 - 118935 (+)
Gene ID: k141_21846_111
Type: TC
Location: 119313 - 120719 (+)
Gene ID: k141_21846_112
Type: pfam
Location: 120769 - 121101 (+)
Gene ID: k141_21846_113
Type: TC
Location: 121142 - 122437 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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