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Cluster: CGMR050395_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_198545 k141_198545_103 108460 109737 - GT30
CAZyme k141_198545 k141_198545_104 110204 111205 + GT9
CAZyme k141_198545 k141_198545_105 111202 112326 + GT4
pfam k141_198545 k141_198545_106 112319 113116 + Kdo
CAZyme k141_198545 k141_198545_107 113129 114145 + GT8
CAZyme k141_198545 k141_198545_108 114139 115158 + GT8
pfam k141_198545 k141_198545_109 115155 115847 + ABC1 | WaaY
CAZyme k141_198545 k141_198545_110 115943 116923 + GT2
TC k141_198545 k141_198545_111 117003 118262 + 9.B.67.5.1
CAZyme k141_198545 k141_198545_112 118305 119267 - GT9
CAZyme k141_198545 k141_198545_113 119271 120317 - GT9
Gene ID: k141_198545_103
Type: CAZyme
Location: 108460 - 109737 (-)
Gene ID: k141_198545_104
Type: CAZyme
Location: 110204 - 111205 (+)
Gene ID: k141_198545_105
Type: CAZyme
Location: 111202 - 112326 (+)
Gene ID: k141_198545_106
Type: pfam
Location: 112319 - 113116 (+)
Gene ID: k141_198545_107
Type: CAZyme
Location: 113129 - 114145 (+)
Gene ID: k141_198545_108
Type: CAZyme
Location: 114139 - 115158 (+)
Gene ID: k141_198545_109
Type: pfam
Location: 115155 - 115847 (+)
Gene ID: k141_198545_110
Type: CAZyme
Location: 115943 - 116923 (+)
Gene ID: k141_198545_111
Type: TC
Location: 117003 - 118262 (+)
Gene ID: k141_198545_112
Type: CAZyme
Location: 118305 - 119267 (-)
Gene ID: k141_198545_113
Type: CAZyme
Location: 119271 - 120317 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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