Cluster: CGMR050087_CGC6
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR050087
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_39456 | k141_39456_50 | 55995 | 57542 | + | 2.A.66.1.40 |
| CAZyme | k141_39456 | k141_39456_51 | 57539 | 58501 | + | GT2 |
| CAZyme | k141_39456 | k141_39456_52 | 58532 | 59377 | + | GT2 |
| CAZyme | k141_39456 | k141_39456_53 | 59566 | 60768 | + | GT4 |
| CAZyme | k141_39456 | k141_39456_54 | 60855 | 61943 | + | GT4 |
| pfam | k141_39456 | k141_39456_55 | 61940 | 62452 | + | Hexapep | Hexapep_2 |
| CAZyme | k141_39456 | k141_39456_56 | 62455 | 63177 | + | CE4 |
| NULL(UNKNOWN) | k141_39456 | k141_39456_57 | 63184 | 64533 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_39456 | k141_39456_58 | 64539 | 65597 | + | GT4 |
| NULL(UNKNOWN) | k141_39456 | k141_39456_59 | 65594 | 66127 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_39456 | k141_39456_60 | 66127 | 66840 | + | GT26 |
| pfam | k141_39456 | k141_39456_61 | 66840 | 67826 | + | FemAB | Acetyltransf_6 |
| CAZyme | k141_39456 | k141_39456_62 | 67852 | 68700 | + | CE4 |
Gene ID: k141_39456_50
Type: TC
Location: 55995 - 57542 (+)
Type: TC
Location: 55995 - 57542 (+)
Gene ID: k141_39456_51
Type: CAZyme
Location: 57539 - 58501 (+)
Type: CAZyme
Location: 57539 - 58501 (+)
Gene ID: k141_39456_52
Type: CAZyme
Location: 58532 - 59377 (+)
Type: CAZyme
Location: 58532 - 59377 (+)
Gene ID: k141_39456_53
Type: CAZyme
Location: 59566 - 60768 (+)
Type: CAZyme
Location: 59566 - 60768 (+)
Gene ID: k141_39456_54
Type: CAZyme
Location: 60855 - 61943 (+)
Type: CAZyme
Location: 60855 - 61943 (+)
Gene ID: k141_39456_55
Type: pfam
Location: 61940 - 62452 (+)
Type: pfam
Location: 61940 - 62452 (+)
Gene ID: k141_39456_56
Type: CAZyme
Location: 62455 - 63177 (+)
Type: CAZyme
Location: 62455 - 63177 (+)
Gene ID: k141_39456_57
Type:
Location: 63184 - 64533 (+)
Type:
Location: 63184 - 64533 (+)
Gene ID: k141_39456_58
Type: CAZyme
Location: 64539 - 65597 (+)
Type: CAZyme
Location: 64539 - 65597 (+)
Gene ID: k141_39456_59
Type:
Location: 65594 - 66127 (+)
Type:
Location: 65594 - 66127 (+)
Gene ID: k141_39456_60
Type: CAZyme
Location: 66127 - 66840 (+)
Type: CAZyme
Location: 66127 - 66840 (+)
Gene ID: k141_39456_61
Type: pfam
Location: 66840 - 67826 (+)
Type: pfam
Location: 66840 - 67826 (+)
Gene ID: k141_39456_62
Type: CAZyme
Location: 67852 - 68700 (+)
Type: CAZyme
Location: 67852 - 68700 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
UBA1820
Genus
Merdimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.