Cluster: CGMR049817_CGC38
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR049817
- CGC Family ID: CGCFAM_00419
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_21619 | k141_21619_45 | 45295 | 46161 | - | 2.A.7.2.1 |
| TF | k141_21619 | k141_21619_46 | 46183 | 46665 | - | Trans_reg_C |
| NULL(UNKNOWN) | k141_21619 | k141_21619_47 | 46665 | 46799 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_21619 | k141_21619_48 | 46828 | 49125 | - | 3.A.3.23.2 |
| pfam | k141_21619 | k141_21619_49 | 49500 | 50240 | - | DDE_Tnp_1 |
| NULL(UNKNOWN) | k141_21619 | k141_21619_50 | 50468 | 51049 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_21619 | k141_21619_51 | 51246 | 54701 | - | CBM4 | CBM4 | CBM4 | CBM4 | GH16_3 |
| CAZyme | k141_21619 | k141_21619_52 | 54698 | 57142 | - | GH3 |
| TC | k141_21619 | k141_21619_53 | 57264 | 58109 | - | 3.A.1.1.13 |
| TC | k141_21619 | k141_21619_54 | 58113 | 59075 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | k141_21619 | k141_21619_55 | 59146 | 60531 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_21619 | k141_21619_56 | 60785 | 63484 | + | GH94 |
| CAZyme | k141_21619 | k141_21619_57 | 63513 | 65924 | + | GH94 |
Gene ID: k141_21619_45
Type: TC
Location: 45295 - 46161 (-)
Type: TC
Location: 45295 - 46161 (-)
Gene ID: k141_21619_46
Type: TF
Location: 46183 - 46665 (-)
Type: TF
Location: 46183 - 46665 (-)
Gene ID: k141_21619_47
Type:
Location: 46665 - 46799 (-)
Type:
Location: 46665 - 46799 (-)
Gene ID: k141_21619_48
Type: TC
Location: 46828 - 49125 (-)
Type: TC
Location: 46828 - 49125 (-)
Gene ID: k141_21619_49
Type: pfam
Location: 49500 - 50240 (-)
Type: pfam
Location: 49500 - 50240 (-)
Gene ID: k141_21619_50
Type:
Location: 50468 - 51049 (-)
Type:
Location: 50468 - 51049 (-)
Gene ID: k141_21619_51
Type: CAZyme
Location: 51246 - 54701 (-)
Type: CAZyme
Location: 51246 - 54701 (-)
Gene ID: k141_21619_52
Type: CAZyme
Location: 54698 - 57142 (-)
Type: CAZyme
Location: 54698 - 57142 (-)
Gene ID: k141_21619_53
Type: TC
Location: 57264 - 58109 (-)
Type: TC
Location: 57264 - 58109 (-)
Gene ID: k141_21619_54
Type: TC
Location: 58113 - 59075 (-)
Type: TC
Location: 58113 - 59075 (-)
Gene ID: k141_21619_55
Type:
Location: 59146 - 60531 (-)
Type:
Location: 59146 - 60531 (-)
Gene ID: k141_21619_56
Type: CAZyme
Location: 60785 - 63484 (+)
Type: CAZyme
Location: 60785 - 63484 (+)
Gene ID: k141_21619_57
Type: CAZyme
Location: 63513 - 65924 (+)
Type: CAZyme
Location: 63513 - 65924 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Species
Sellimonas catena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.