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Cluster: CGMR049817_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_19522 k141_19522_3 2191 4419 - GH146
TC k141_19522 k141_19522_4 4517 5203 + 9.B.28.1.8
pfam k141_19522 k141_19522_5 5200 6612 - DUF4340 | DUF4340
pfam k141_19522 k141_19522_6 6629 8050 - ABC_transp_aux | DUF7088
TC k141_19522 k141_19522_7 8069 8776 - 3.A.1.132.1
TC k141_19522 k141_19522_8 8773 9717 - 3.A.1.132.9
TC k141_19522 k141_19522_9 9747 10580 - 3.A.1.1.11
TC k141_19522 k141_19522_10 10597 11463 - 3.A.1.1.11
STP k141_19522 k141_19522_11 11621 12967 - SBP_bac_1
CAZyme k141_19522 k141_19522_12 13031 15004 - GH31_4
pfam k141_19522 k141_19522_13 15388 16506 + Acetyltransf_9
TC k141_19522 k141_19522_14 16600 17292 - 1.C.82.1.1
Gene ID: k141_19522_3
Type: CAZyme
Location: 2191 - 4419 (-)
Gene ID: k141_19522_4
Type: TC
Location: 4517 - 5203 (+)
Gene ID: k141_19522_5
Type: pfam
Location: 5200 - 6612 (-)
Gene ID: k141_19522_6
Type: pfam
Location: 6629 - 8050 (-)
Gene ID: k141_19522_7
Type: TC
Location: 8069 - 8776 (-)
Gene ID: k141_19522_8
Type: TC
Location: 8773 - 9717 (-)
Gene ID: k141_19522_9
Type: TC
Location: 9747 - 10580 (-)
Gene ID: k141_19522_10
Type: TC
Location: 10597 - 11463 (-)
Gene ID: k141_19522_11
Type: STP
Location: 11621 - 12967 (-)
Gene ID: k141_19522_12
Type: CAZyme
Location: 13031 - 15004 (-)
Gene ID: k141_19522_13
Type: pfam
Location: 15388 - 16506 (+)
Gene ID: k141_19522_14
Type: TC
Location: 16600 - 17292 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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