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Cluster: CGMR049742_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_982577 k141_982577_27 30583 31776 + 3.D.7.2.3
TC k141_982577 k141_982577_28 31801 33519 + 3.D.7.2.3
TC k141_982577 k141_982577_29 33536 34306 + 3.D.7.2.3
TC k141_982577 k141_982577_30 34303 34761 + 3.D.7.2.3
pfam k141_982577 k141_982577_31 34816 35742 - NmrA | NAD_binding_10
TC k141_982577 k141_982577_32 35888 36517 + 1.A.62.2.1
pfam k141_982577 k141_982577_33 36566 36913 + GtrA_DPMS_TM
CAZyme k141_982577 k141_982577_34 36944 37885 + GT2
CAZyme k141_982577 k141_982577_35 37925 39640 + GT83
TC k141_982577 k141_982577_36 39720 42248 - 1.B.14.6.14
STP k141_982577 k141_982577_37 42449 42925 + CYTH
STP k141_982577 k141_982577_38 43000 45057 - HATPase_c
TC k141_982577 k141_982577_39 45164 47722 - 3.A.9.1.2
Gene ID: k141_982577_27
Type: TC
Location: 30583 - 31776 (+)
Gene ID: k141_982577_28
Type: TC
Location: 31801 - 33519 (+)
Gene ID: k141_982577_29
Type: TC
Location: 33536 - 34306 (+)
Gene ID: k141_982577_30
Type: TC
Location: 34303 - 34761 (+)
Gene ID: k141_982577_31
Type: pfam
Location: 34816 - 35742 (-)
Gene ID: k141_982577_32
Type: TC
Location: 35888 - 36517 (+)
Gene ID: k141_982577_33
Type: pfam
Location: 36566 - 36913 (+)
Gene ID: k141_982577_34
Type: CAZyme
Location: 36944 - 37885 (+)
Gene ID: k141_982577_35
Type: CAZyme
Location: 37925 - 39640 (+)
Gene ID: k141_982577_36
Type: TC
Location: 39720 - 42248 (-)
Gene ID: k141_982577_37
Type: STP
Location: 42449 - 42925 (+)
Gene ID: k141_982577_38
Type: STP
Location: 43000 - 45057 (-)
Gene ID: k141_982577_39
Type: TC
Location: 45164 - 47722 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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