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Cluster: CGMR049742_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_223846 k141_223846_31 34122 35960 - GH13_46
CAZyme k141_223846 k141_223846_32 36013 38700 - CBM35
pfam k141_223846 k141_223846_33 38783 39214 - DUF454
pfam k141_223846 k141_223846_34 39172 40149 - Formyl_trans_N | Formyl_trans_C
TC k141_223846 k141_223846_35 40160 41941 - 2.A.49.6.1
CAZyme k141_223846 k141_223846_36 42001 43932 - CE20 | CE20
pfam k141_223846 k141_223846_37 43942 44472 - Sua5_yciO_yrdC
TC k141_223846 k141_223846_38 44767 46386 + 3.A.1.121.4
TC k141_223846 k141_223846_39 46462 47709 + 1.B.16.2.1
Gene ID: k141_223846_31
Type: CAZyme
Location: 34122 - 35960 (-)
Gene ID: k141_223846_32
Type: CAZyme
Location: 36013 - 38700 (-)
Gene ID: k141_223846_33
Type: pfam
Location: 38783 - 39214 (-)
Gene ID: k141_223846_34
Type: pfam
Location: 39172 - 40149 (-)
Gene ID: k141_223846_35
Type: TC
Location: 40160 - 41941 (-)
Gene ID: k141_223846_36
Type: CAZyme
Location: 42001 - 43932 (-)
Gene ID: k141_223846_37
Type: pfam
Location: 43942 - 44472 (-)
Gene ID: k141_223846_38
Type: TC
Location: 44767 - 46386 (+)
Gene ID: k141_223846_39
Type: TC
Location: 46462 - 47709 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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