Cluster: CGMR049742_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR049742
- CGC Family ID: CGCFAM_00069
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_47867 | k141_47867_45 | 46034 | 48403 | - | GH95 |
| TC | k141_47867 | k141_47867_46 | 48495 | 50144 | - | 4.C.1.1.4 |
| TF | k141_47867 | k141_47867_47 | 50167 | 50742 | - | HTH_3 |
| CAZyme | k141_47867 | k141_47867_48 | 50905 | 51903 | - | GT27 |
| pfam | k141_47867 | k141_47867_49 | 51900 | 52823 | - | Lip_A_acyltrans |
| pfam | k141_47867 | k141_47867_50 | 52799 | 54124 | - | UPF0004 | Radical_SAM |
| TC | k141_47867 | k141_47867_51 | 54356 | 56017 | + | 4.C.1.1.4 |
Gene ID: k141_47867_45
Type: CAZyme
Location: 46034 - 48403 (-)
Type: CAZyme
Location: 46034 - 48403 (-)
Gene ID: k141_47867_46
Type: TC
Location: 48495 - 50144 (-)
Type: TC
Location: 48495 - 50144 (-)
Gene ID: k141_47867_47
Type: TF
Location: 50167 - 50742 (-)
Type: TF
Location: 50167 - 50742 (-)
Gene ID: k141_47867_48
Type: CAZyme
Location: 50905 - 51903 (-)
Type: CAZyme
Location: 50905 - 51903 (-)
Gene ID: k141_47867_49
Type: pfam
Location: 51900 - 52823 (-)
Type: pfam
Location: 51900 - 52823 (-)
Gene ID: k141_47867_50
Type: pfam
Location: 52799 - 54124 (-)
Type: pfam
Location: 52799 - 54124 (-)
Gene ID: k141_47867_51
Type: TC
Location: 54356 - 56017 (+)
Type: TC
Location: 54356 - 56017 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
CHK158-818
Genus
Gallibacteroides
Species
Gallibacteroides sp017467745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.