Cluster: CGMR048767_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR048767
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_28213 | k141_28213_5 | 4578 | 6179 | + | 3.A.1.5.27 |
| TC | k141_28213 | k141_28213_6 | 6335 | 7291 | + | 3.A.1.5.38 |
| TC | k141_28213 | k141_28213_7 | 7296 | 9335 | + | 3.A.1.5.35 |
| TC | k141_28213 | k141_28213_8 | 9336 | 10157 | + | 3.A.1.5.35 |
| CAZyme | k141_28213 | k141_28213_9 | 10224 | 11264 | + | CE7 |
| CAZyme | k141_28213 | k141_28213_10 | 11261 | 12247 | + | CE7 |
Gene ID: k141_28213_5
Type: TC
Location: 4578 - 6179 (+)
Type: TC
Location: 4578 - 6179 (+)
Gene ID: k141_28213_6
Type: TC
Location: 6335 - 7291 (+)
Type: TC
Location: 6335 - 7291 (+)
Gene ID: k141_28213_7
Type: TC
Location: 7296 - 9335 (+)
Type: TC
Location: 7296 - 9335 (+)
Gene ID: k141_28213_8
Type: TC
Location: 9336 - 10157 (+)
Type: TC
Location: 9336 - 10157 (+)
Gene ID: k141_28213_9
Type: CAZyme
Location: 10224 - 11264 (+)
Type: CAZyme
Location: 10224 - 11264 (+)
Gene ID: k141_28213_10
Type: CAZyme
Location: 11261 - 12247 (+)
Type: CAZyme
Location: 11261 - 12247 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Lancefieldella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.