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Cluster: CGMR048616_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_116276 k141_116276_33 39285 40322 + GT2
pfam k141_116276 k141_116276_34 40319 42301 + Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam k141_116276 k141_116276_35 42298 43200 + Polysacc_deac_1
CAZyme k141_116276 k141_116276_36 43197 44852 + GT83
TC k141_116276 k141_116276_37 44852 45187 + 2.A.7.22.2
TC k141_116276 k141_116276_38 45184 45588 + 2.A.7.22.1
pfam k141_116276 k141_116276_39 45545 46141 - ACPS
TC k141_116276 k141_116276_40 46242 47291 - 2.A.86.1.2
TC k141_116276 k141_116276_41 47437 48654 + 2.A.1.46.7
pfam k141_116276 k141_116276_42 48658 49215 - DcrB
TC k141_116276 k141_116276_43 49288 49953 - 2.A.88.8.6
pfam k141_116276 k141_116276_44 50121 50363 + TusA
TC k141_116276 k141_116276_45 50465 51058 - 2.A.95.1.5
pfam k141_116276 k141_116276_46 51236 52339 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme k141_116276 k141_116276_47 52495 54756 + CBM48 | GH13_9
CAZyme k141_116276 k141_116276_48 54753 56726 + CBM48 | GH13_11
pfam k141_116276 k141_116276_49 56744 58039 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme k141_116276 k141_116276_50 58039 59472 + GT5
CAZyme k141_116276 k141_116276_51 59491 61938 + GT35
pfam k141_116276 k141_116276_52 62026 63534 - DAO | DAO_C
STP k141_116276 k141_116276_53 63821 64153 + Rhodanese
TC k141_116276 k141_116276_54 64201 65031 + 9.B.104.1.1
TF k141_116276 k141_116276_55 65048 65806 + HTH_DeoR
TF k141_116276 k141_116276_56 65889 68594 - GerE
CAZyme k141_116276 k141_116276_57 69179 71572 + GT35
CAZyme k141_116276 k141_116276_58 71582 73660 + GH77
TC k141_116276 k141_116276_59 73771 75087 - 2.A.8.1.4
Gene ID: k141_116276_33
Type: CAZyme
Location: 39285 - 40322 (+)
Gene ID: k141_116276_34
Type: pfam
Location: 40319 - 42301 (+)
Gene ID: k141_116276_35
Type: pfam
Location: 42298 - 43200 (+)
Gene ID: k141_116276_36
Type: CAZyme
Location: 43197 - 44852 (+)
Gene ID: k141_116276_37
Type: TC
Location: 44852 - 45187 (+)
Gene ID: k141_116276_38
Type: TC
Location: 45184 - 45588 (+)
Gene ID: k141_116276_39
Type: pfam
Location: 45545 - 46141 (-)
Gene ID: k141_116276_40
Type: TC
Location: 46242 - 47291 (-)
Gene ID: k141_116276_41
Type: TC
Location: 47437 - 48654 (+)
Gene ID: k141_116276_42
Type: pfam
Location: 48658 - 49215 (-)
Gene ID: k141_116276_43
Type: TC
Location: 49288 - 49953 (-)
Gene ID: k141_116276_44
Type: pfam
Location: 50121 - 50363 (+)
Gene ID: k141_116276_45
Type: TC
Location: 50465 - 51058 (-)
Gene ID: k141_116276_46
Type: pfam
Location: 51236 - 52339 (+)
Gene ID: k141_116276_47
Type: CAZyme
Location: 52495 - 54756 (+)
Gene ID: k141_116276_48
Type: CAZyme
Location: 54753 - 56726 (+)
Gene ID: k141_116276_49
Type: pfam
Location: 56744 - 58039 (+)
Gene ID: k141_116276_50
Type: CAZyme
Location: 58039 - 59472 (+)
Gene ID: k141_116276_51
Type: CAZyme
Location: 59491 - 61938 (+)
Gene ID: k141_116276_52
Type: pfam
Location: 62026 - 63534 (-)
Gene ID: k141_116276_53
Type: STP
Location: 63821 - 64153 (+)
Gene ID: k141_116276_54
Type: TC
Location: 64201 - 65031 (+)
Gene ID: k141_116276_55
Type: TF
Location: 65048 - 65806 (+)
Gene ID: k141_116276_56
Type: TF
Location: 65889 - 68594 (-)
Gene ID: k141_116276_57
Type: CAZyme
Location: 69179 - 71572 (+)
Gene ID: k141_116276_58
Type: CAZyme
Location: 71582 - 73660 (+)
Gene ID: k141_116276_59
Type: TC
Location: 73771 - 75087 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_116276_33 vegetarian > omnivore 1.15487 0.03330
k141_116276_40 vegetarian > omnivore 1.05300 0.03330

🧭 Explore Read Mapping of CGC

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