Cluster: CGMR048616_CGC62
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR048616
- CGC Family ID: CGCFAM_00426
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_39444 | k141_39444_108 | 120344 | 121645 | + | 2.A.1.14.2 |
| CAZyme | k141_39444 | k141_39444_109 | 121663 | 124026 | + | GH31_2 |
| TC | k141_39444 | k141_39444_110 | 124117 | 125712 | - | 3.A.1.121.4 |
| peptidase | k141_39444 | k141_39444_111 | 125935 | 126855 | + | C82.UPB |
| TF | k141_39444 | k141_39444_112 | 126897 | 127613 | - | GntR |
| TC | k141_39444 | k141_39444_113 | 127629 | 128951 | - | 4.A.3.2.9 |
| CAZyme | k141_39444 | k141_39444_114 | 129003 | 130379 | - | GH1 |
| TC | k141_39444 | k141_39444_115 | 130541 | 131581 | - | 8.A.5.1.3 |
| TC | k141_39444 | k141_39444_116 | 131684 | 133207 | - | 1.B.17.3.8 |
| TC | k141_39444 | k141_39444_117 | 133207 | 134778 | - | 2.A.1.3.2 |
| TC | k141_39444 | k141_39444_118 | 134775 | 135314 | - | 8.A.1.1.2 |
Gene ID: k141_39444_108
Type: TC
Location: 120344 - 121645 (+)
Type: TC
Location: 120344 - 121645 (+)
Gene ID: k141_39444_109
Type: CAZyme
Location: 121663 - 124026 (+)
Type: CAZyme
Location: 121663 - 124026 (+)
Gene ID: k141_39444_110
Type: TC
Location: 124117 - 125712 (-)
Type: TC
Location: 124117 - 125712 (-)
Gene ID: k141_39444_111
Type: peptidase
Location: 125935 - 126855 (+)
Type: peptidase
Location: 125935 - 126855 (+)
Gene ID: k141_39444_112
Type: TF
Location: 126897 - 127613 (-)
Type: TF
Location: 126897 - 127613 (-)
Gene ID: k141_39444_113
Type: TC
Location: 127629 - 128951 (-)
Type: TC
Location: 127629 - 128951 (-)
Gene ID: k141_39444_114
Type: CAZyme
Location: 129003 - 130379 (-)
Type: CAZyme
Location: 129003 - 130379 (-)
Gene ID: k141_39444_115
Type: TC
Location: 130541 - 131581 (-)
Type: TC
Location: 130541 - 131581 (-)
Gene ID: k141_39444_116
Type: TC
Location: 131684 - 133207 (-)
Type: TC
Location: 131684 - 133207 (-)
Gene ID: k141_39444_117
Type: TC
Location: 133207 - 134778 (-)
Type: TC
Location: 133207 - 134778 (-)
Gene ID: k141_39444_118
Type: TC
Location: 134775 - 135314 (-)
Type: TC
Location: 134775 - 135314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter kobei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_39444_108 | vegetarian > omnivore | 1.04374 | 0.03330 |
| k141_39444_113 | vegetarian > omnivore | 1.03782 | 0.03330 |
| k141_39444_113 | vegetarian > vegan | 1.18314 | 0.04949 |
| k141_39444_114 | vegetarian > omnivore | 1.09935 | 0.03330 |
| k141_39444_115 | vegetarian > omnivore | 1.49093 | 0.03330 |
| k141_39444_116 | vegetarian > omnivore | 1.09671 | 0.03330 |
| k141_39444_117 | vegetarian > omnivore | 1.16325 | 0.03330 |